Pre_GI Gene

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Host: NC_002947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002947:3404000 Pseudomonas putida KT2440, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
34043073404510204medium-chain acyl-CoA ligase domain proteinQuickGO ontologyBLASTP
34046473405480834lipopolysaccharide core biosynthesis protein putativeQuickGO ontologyBLASTP
34055513406051501methylated-DNA--protein-cysteine methyltransferaseQuickGO ontologyBLASTP
34060563406298243hypothetical proteinBLASTP
34062953407038744carbon-nitrogen hydrolase family proteinQuickGO ontologyBLASTP
34072533407978726serinethreonine protein phosphatase putativeQuickGO ontologyBLASTP
34079263408540615transporter LysE familyQuickGO ontologyBLASTP
34086223409431810transcriptional regulator AraC familyQuickGO ontologyBLASTP
34095053409939435amino acid efflux protein putativeQuickGO ontologyBLASTP
340996734111631197hypothetical proteinBLASTP
34122013412821621transporter LysE familyQuickGO ontologyBLASTP
341298834146131626phage recombinase putativeQuickGO ontologyBLASTP
34148863415104219hypothetical proteinBLASTP
34150973415411315hypothetical proteinBLASTP
341540834172371830DNA cytosine methyltransferase family proteinQuickGO ontologyBLASTP
34172343418037804hypothetical proteinBLASTP
34180913418408318pyocin R2_PP transcriptional activator prtNQuickGO ontologyBLASTP
34185673418857291DNA-binding protein Roi-related proteinQuickGO ontologyBLASTP
34194503420181732pyocin R2_PP transcriptional repressor CIC2 familyQuickGO ontologyBLASTP
34202603420523264regulator protein putativeQuickGO ontologyBLASTP
34204343420607174hypothetical protein
34209703421149180hypothetical proteinBLASTP
34216323421850219C4-type zinc finger protein DksATraR familyQuickGO ontologyBLASTP
342184034240502211pyocin R2_PP traC domain proteinQuickGO ontologyBLASTP
34240473424409363pyocin R2_PP conserved hypothetical proteinQuickGO ontologyBLASTP
34249213425268348pyocin R2_PP holinQuickGO ontologyBLASTP
34254333426044612hypothetical proteinBLASTP
342604934280852037terminase large subunit putativeQuickGO ontologyBLASTP