Pre_GI: BLASTP Hits

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Query: NC_002947:3404000:3415408 Pseudomonas putida KT2440, complete genome

Start: 3415408, End: 3417237, Length: 1830

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014910:3727887:3732288373228837343482061Alicycliphilus denitrificans BC chromosome, complete genomec-5 cytosine-specific DNA methylase1e-135483
NC_008786:4040864:4040864404086440423481485Verminephrobacter eiseniae EF01-2, complete genomeC-5 cytosine-specific DNA methylase1e-88327
NC_014837:2354241:2368175236817523699291755Pantoea sp. At-9b chromosome, complete genomeC-5 cytosine-specific DNA methylase7e-84311
NC_017033:1557981:1559439155943915610941656Frateuria aurantia DSM 6220 chromosome, complete genomesite-specific DNA methylase2e-83310
NC_020181:5217000:5239111523911152409611851Enterobacter aerogenes EA1509E, complete genomeFIG00731669: hypothetical protein3e-83310
NC_009648:1541699:1557676155767615595351860Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative site-specific DNA methylase7e-82305
NC_012914:1851102:1875205187520518768811677Paenibacillus sp. JDR-2, complete genomeC-5 cytosine-specific DNA methylase7e-81301
NC_012731:2083650:2102675210267521046451971Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative site-specific DNA methylase2e-75283
NC_016816:1970189:1975893197589319779712079Pantoea ananatis LMG 5342, complete genomeC-5 cytosine-specific DNA methylase4e-75283
NC_004578:3849835:3862800386280038645841785Pseudomonas syringae pv. tomato str. DC3000, complete genomeC-5 cytosine-specific DNA methylase family protein1e-74281
NC_017986:4931104:4948578494857849505211944Pseudomonas putida ND6 chromosome, complete genomeC-5 cytosine-specific DNA methylase8e-74278
NC_017297:2531750:2560278256027825617081431Clostridium botulinum F str. 230613 chromosome, complete genomeC-5 cytosine-specific DNA methylase5e-71269
NC_009699:2552195:2560139256013925615691431Clostridium botulinum F str. Langeland chromosome, complete genomeC-5 cytosine-specific DNA methylase5e-71269
NC_014551:576000:5869135869135882891377Bacillus amyloliquefaciens DSM 7, complete genomeC-5 cytosine-specific DNA methylase4e-70266
NC_020272:1311932:1329388132938813307641377Bacillus amyloliquefaciens IT-45, complete genomeC-5 cytosine-specific DNA methylase6e-70265
NC_007005:3414579:3415442341544234175742133Pseudomonas syringae pv. syringae B728a, complete genomeC-5 cytosine-specific DNA methylase4e-69263
NC_015275:911999:9246639246639261831521Clostridium lentocellum DSM 5427 chromosome, complete genomeC-5 cytosine-specific DNA methylase8e-67255
NC_009720:4087831:4101674410167441034131740Xanthobacter autotrophicus Py2, complete genomeC-5 cytosine-specific DNA methylase5e-55216
NC_011283:2836000:2905357290535729069281572Klebsiella pneumoniae 342 chromosome, complete genomeDNA modification methylase2e-36154
NC_015690:1186545:1203559120355912047491191Paenibacillus mucilaginosus KNP414 chromosome, complete genomeC-5 cytosine-specific DNA methylase3e-36154
NC_020054:4983691:5002860500286050049892130Fibrella aestuarina BUZ 2 drat genomeDNA (cytosine-5-)-methyltransferase3e-30134
NC_015914:279413:2936442936442955961953Cyclobacterium marinum DSM 745 chromosome, complete genomeC-5 cytosine-specific DNA methylase1e-28128
NC_010125:3667452:3667452366745236685161065Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein4e-24113
NC_020541:468584:4823134823134833261014Rhodanobacter sp. 2APBS1, complete genomeDNA-methyltransferase Dcm9e-0962.4
NC_003155:6667928:6702263670226367038101548Streptomyces avermitilis MA-4680, complete genometype II restriction-modification system DNA cytosine-specific methylase7e-0859.7
NC_014836:1551965:158589615858961586816921Desulfurispirillum indicum S5 chromosome, complete genomeDNA-cytosine methyltransferase9e-0755.8