Pre_GI: BLASTP Hits

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Query: NC_002947:3404000:3419450 Pseudomonas putida KT2440, complete genome

Start: 3419450, End: 3420181, Length: 732

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:5509569:552387155238715524602732Pseudomonas putida ND6 chromosome, complete genometranscriptional repressor pyocin R2 PP9e-134475
NC_004578:3849835:385799038579903858721732Pseudomonas syringae pv. tomato str. DC3000, complete genomerepressor protein c23e-103374
NC_004129:2201780:221380922138092214522714Pseudomonas fluorescens Pf-5, complete genomepeptidase S24-like domain2e-65248
NC_011083:374000:385883385883386533651Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,P22 repressor protein c22e-30132
NC_007946:2625461:262998526299852630635651Escherichia coli UTI89, complete genomerepressor protein4e-30131
NC_009800:289000:301440301440302090651Escherichia coli HS, complete genomeP22 repressor protein c22e-29129
NC_012947:3015985:302163430216343022284651Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeXRE family transcriptional regulator2e-29129
NC_013361:3112023:312984531298453130495651Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI2e-29129
NC_013941:3300000:330265133026513303301651Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeP22 repressor protein c22e-29129
NC_010002:2110953:212346721234672124114648Delftia acidovorans SPH-1, complete genomepeptidase S24 and S26 domain protein3e-29129
NC_013850:1887556:189996518999651900627663Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, XRE family3e-28125
NC_015663:4767443:478544147854414786193753Enterobacter aerogenes KCTC 2190 chromosome, complete genomeP22 repressor protein c21e-26119
NC_010554:2646806:265134526513452651992648Proteus mirabilis HI4320, complete genomephage repressor1e-24113
NC_009778:2993218:301640330164033017065663Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-24112
NC_011415:2153243:216098621609862161642657Escherichia coli SE11 chromosome, complete genomeputative phage repressor3e-24112
NC_015379:4691868:469213346921334692831699Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative phage regulatory protein2e-23109
NC_012660:3116500:312771631277163128423708Pseudomonas fluorescens SBW25 chromosome, complete genomee14 prophage; putative phage repressor3e-23108
NC_012731:2083650:209731020973102098035726Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative repressor protein of prophage4e-23108
NC_007645:605500:605820605820606407588Hahella chejuensis KCTC 2396, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidase)1e-21103
NC_008258:269806:287337287337287969633Shigella flexneri 5 str. 8401, complete genomeputative prophage repressor CI8e-22103
NC_011601:2614691:261961826196182620331714Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein8e-22103
NC_012759:4132527:414282841428284143541714Escherichia coli BW2952 chromosome, complete genomeRepressor protein CI8e-22103
NC_004431:3040953:305923330592333059859627Escherichia coli CFT073, complete genomePutative repressor protein of prophage2e-21102
NC_011353:305820:305820305820306533714Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage repressor4e-21101
NC_002655:301940:301940301940302653714Escherichia coli O157:H7 EDL933, complete genomeputative cI repressor protein for prophage CP-933H4e-21101
NC_002695:301939:301939301939302652714Escherichia coli O157:H7 str. Sakai, complete genomecI4e-21101
NC_009783:1956000:195674419567441957409666Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein5e-21101
NC_017328:303987:317642317642318337696Shigella flexneri 2002017 chromosome, complete genomeCI protein8e-21100
NC_013364:2645438:265235726523572652980624Escherichia coli O111:H- str. 11128, complete genomeputative phage repressor protein CI2e-2099.4
NC_008563:1175035:118767011876701188365696Escherichia coli APEC O1, complete genomeputative CI repressor of bacteriophage3e-2099
NC_011742:1177946:119125811912581191959702Escherichia coli S88 chromosome, complete genomeRepressor protein CI from phage origin3e-2098.6
NC_013941:975353:989229989229989882654Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCI protein4e-2098.2
NC_011601:1039500:105177110517711052424654Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein4e-2098.2
NC_007946:1239278:125028212502821250935654Escherichia coli UTI89, complete genomeputative CI repressor of bacteriophage4e-2098.2
NC_004431:1401681:141242714124271412849423Escherichia coli CFT073, complete genomeRepressor protein7e-2097.4
NC_009708:2537557:255467625546762555386711Yersinia pseudotuberculosis IP 31758 chromosome, complete genomerepressor protein C22e-1996.3
NC_014306:3524980:356790335679033568601699Erwinia billingiae Eb661, complete genomeRepressor protein cI2e-1995.9
NC_020418:3133831:313802131380213138731711Morganella morganii subsp. morganii KT, complete genomerepressor protein CI3e-1995.5
NC_017047:1906000:190737719073771908024648Rahnella aquatilis HX2 chromosome, complete genomeputative repressor protein of prophage3e-1995.5
NC_011742:2863316:286734128673412868015675Escherichia coli S88 chromosome, complete genomerepressor protein phage e14; e14 prophage3e-1995.1
NC_000913:1188999:120148212014821202156675Escherichia coli K12, complete genomee14 prophage; repressor protein phage e143e-1995.1
NC_008563:2946391:295003029500302950704675Escherichia coli APEC O1, complete genomeputative phage repressor3e-1995.1
NC_007946:2931364:293500329350032935677675Escherichia coli UTI89, complete genomeputative phage repressor3e-1995.1
AC_000091:1191353:120383612038361204510675Escherichia coli W3110 DNA, complete genomerepressor protein phage e143e-1995.1
NC_011750:5045927:505908250590825059756675Escherichia coli IAI39 chromosome, complete genomerepressor protein phage e14; e14 prophage1e-1893.6
NC_012779:2184927:220196422019642202635672Edwardsiella ictaluri 93-146, complete genomerepressor protein CI2e-1893.2
NC_017986:4091051:410215841021584102514357Pseudomonas putida ND6 chromosome, complete genomerepressor protein CI7e-1890.9
NC_014910:1708045:172518017251801725950771Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s24/s26a/s26b, conserved region protein1e-1790.1
NC_016830:5031819:504224950422495042896648Pseudomonas fluorescens F113 chromosome, complete genomepeptidase s24-like domain protein2e-1789.7
NC_012791:2832001:285731328573132857981669Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family2e-1789.4
NC_015968:3301958:331235333123533313006654Enterobacter asburiae LF7a chromosome, complete genomephage repressor like XRE family transcriptional regulator5e-1788.2
NC_007712:2028500:206857220685722069294723Sodalis glossinidius str. 'morsitans', complete genomephage repressor4e-1684.7
NC_014837:2354241:235780423578042358529726Pantoea sp. At-9b chromosome, complete genomeXRE family transcriptional regulator5e-1684.7
NC_020418:2910593:291496229149622915621660Morganella morganii subsp. morganii KT, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidases)5e-1684.7
NC_011283:4212000:422109942210994221815717Klebsiella pneumoniae 342 chromosome, complete genomephage repressor protein7e-1684.3
NC_016809:1778000:177820117782011778866666Haemophilus influenzae 10810, complete genomehypothetical protein3e-1479
NC_004578:4499143:452278245227824523486705Pseudomonas syringae pv. tomato str. DC3000, complete genomerepressor protein cI7e-1374.3
NC_006138:2288261:230836023083602309070711Desulfotalea psychrophila LSv54, complete genomesimilar to repressor protein4e-1065.1
NC_016809:389561:394152394152394811660Haemophilus influenzae 10810, complete genomehypothetical protein1e-0963.5
NC_009348:1663870:166905016690501669733684Aeromonas salmonicida subsp. salmonicida A449, complete genomephage repressor2e-0963.2
NC_011601:717072:730647730647731354708Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein5e-0961.6
NC_011751:1405381:141919414191941419901708Escherichia coli UMN026 chromosome, complete genomerepressor protein of bacteriophage origin5e-0961.6
NC_002655:1332961:134290313429031343610708Escherichia coli O157:H7 EDL933, complete genomeputative repressor protein CI of bacteriophage BP-933W1e-0860.5
AP010958:5361207:537689453768945377601708Escherichia coli O103:H2 str. 12009 DNA, complete genomephage repressor protein CI1e-0860.5
NC_011353:3276734:328183732818373282544708Escherichia coli O157:H7 str. EC4115 chromosome, complete genomerepressor protein CI1e-0860.5
NC_013008:3231414:323670832367083237415708Escherichia coli O157:H7 str. TW14359 chromosome, complete genomerepressor protein CI1e-0860.5
NC_013353:5361207:537689453768945377601708Escherichia coli O103:H2 str. 12009, complete genomephage repressor protein CI1e-0860.5
NC_013364:1183000:119416011941601194867708Escherichia coli O111:H- str. 11128, complete genomeputative repressor protein1e-0860.5
NC_011740:2072173:211007221100722110779708Escherichia fergusonii ATCC 35469, complete genomerepressor protein of bacteriophage origin1e-0860.1
NC_009524:1627414:163576016357601636419660Psychrobacter sp. PRwf-1 chromosome, complete genomeputative prophage repressor1e-0860.1
NC_013446:3034486:304282630428263043365540Comamonas testosteroni CNB-2, complete genomeputative prophage repressor2e-0859.3
NC_010067:2529750:258744925874492588159711Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-0858.5
NC_015424:2726223:275560227556022756036435Aeromonas veronii B565 chromosome, complete genomephage repressor4e-0651.6
NC_014640:4293430:433149743314974332201705Achromobacter xylosoxidans A8 chromosome, complete genomerepressor protein C2 domain-containing protein8e-0650.8