Pre_GI: BLASTP Hits

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Query: NC_002947:3404000:3420260 Pseudomonas putida KT2440, complete genome

Start: 3420260, End: 3420523, Length: 264

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:5509569:552460955246095524944336Pseudomonas putida ND6 chromosome, complete genomeregulator protein7e-40162
NC_016845:1285435:129535112953511295578228Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-0858.5
NC_002655:2142587:215719721571972157523327Escherichia coli O157:H7 EDL933, complete genomeputative regulatory protein Cro of prophage CP-933R1e-0858.5
NC_016902:2580774:259732525973252597579255Escherichia coli KO11FL chromosome, complete genomeputative antirepressor Cro1e-0858.2
NC_011415:1472500:148367214836721483926255Escherichia coli SE11 chromosome, complete genomeputative transcriptional regulator1e-0858.2
CP002516:2580774:259732525973252597579255Escherichia coli KO11, complete genomeputative antirepressor Cro1e-0858.2
NC_002695:1929215:192971419297141929968255Escherichia coli O157:H7 str. Sakai, complete genomeregulatory protein1e-0858.2
CP002185:1493280:150827115082711508525255Escherichia coli W, complete genomeputative transcriptional regulator1e-0858.2
NC_011740:2072173:210976621097662110026261Escherichia fergusonii ATCC 35469, complete genomeregulatory protein from bacteriophage origin4e-0650.1
NC_013364:1183000:119494611949461195173228Escherichia coli O111:H- str. 11128, complete genomeputative antirepressor6e-0649.7
NC_013353:5361207:537768053776805377907228Escherichia coli O103:H2 str. 12009, complete genomeantirepressor protein Cro6e-0649.7
NC_013008:3231414:323640232364023236629228Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeregulatory protein Cro6e-0649.7
NC_011601:717072:731433731433731660228Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeantirepressor protein6e-0649.7
NC_011353:3276734:328153132815313281758228Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein6e-0649.7
AP010958:5361207:537768053776805377907228Escherichia coli O103:H2 str. 12009 DNA, complete genomeantirepressor protein Cro6e-0649.7
NC_011751:1405381:141998014199801420207228Escherichia coli UMN026 chromosome, complete genomeregulatory protein from bacteriophage origin6e-0649.7
NC_002655:1332961:134368913436891343916228Escherichia coli O157:H7 EDL933, complete genomeregulatory protein Cro of bacteriophage BP-933W6e-0649.7