Pre_GI Gene

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Host: NC_002947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002947:2589951 Pseudomonas putida KT2440, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25899512590631681phage single-stranded DNA-binding protein putativeQuickGO ontologyBLASTP
25906542591079426phage endodeoxyribonuclease IQuickGO ontologyBLASTP
25910822591531450N-acetylmuramoyl-L-alanine amidase putativeQuickGO ontologyBLASTP
259162025932541635DNA primasehelicaseQuickGO ontologyBLASTP
259313425943121179hypothetical protein
25943492594954606hypothetical proteinBLASTP
259511425972012088DNA polymeraseQuickGO ontologyBLASTP
25972152597430216hypothetical protein
25974652597674210hypothetical protein
25977762598375600phage exonuclease putativeQuickGO ontologyBLASTP
259865926000441386hypothetical proteinBLASTP
26000992600293195hypothetical protein
260052126020951575head-to-tail joining proteinQuickGO ontology
26020732602234162hypothetical protein
26022342603013780capsid assembly protein putativeQuickGO ontology
26038672604835969minor capsid protein 10QuickGO ontologyBLASTP
26048972605484588tail tubular protein AQuickGO ontology
260548826078332346tail tubular protein BQuickGO ontologyBLASTP
26082872608847561hypothetical protein
260885726110462190hypothetical protein
261105926157684710phage internal core proteinQuickGO ontologyBLASTP
261583126174711641phage tail fiber proteinQuickGO ontologyBLASTP
26174712617974504hypothetical protein
26180212618257237hypothetical protein
26182442618531288hypothetical protein
26185392619309771hypothetical proteinBLASTP
261945826211461689DNA maturase BQuickGO ontologyBLASTP
26211832621623441hypothetical protein
26234072623991585antirestriction protein putativeQuickGO ontologyBLASTP
26244062624762357hypothetical protein
26249952625819825integrative genetic element Ppu40 integraseQuickGO ontologyBLASTP
2626119262619173tRNA-HisQuickGO ontology
26263442626682339hypothetical proteinBLASTP
262691326282441332trigger factorQuickGO ontologyBLASTP
26283362628977642ATP-dependent Clp protease proteolytic subunitQuickGO ontologyBLASTP
262904126303691329ATP-dependent protease ATP-binding subunitQuickGO ontologyBLASTP
263053326329292397ATP-dependent protease LaQuickGO ontologyBLASTP
26330822633354273DNA-binding protein HU-betaQuickGO ontologyBLASTP
263353626354071872peptidyl-prolyl cis-trans isomerase D putativeQuickGO ontologyBLASTP
263552426365701047hypothetical proteinBLASTP