Pre_GI: BLASTP Hits

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Query: NC_002947:2589951:2591082 Pseudomonas putida KT2440, complete genome

Start: 2591082, End: 2591531, Length: 450

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009937:4122652:413172941317294132214486Azorhizobium caulinodans ORS 571, complete genomeputative N-acetylmuramoyl-L-alanine amidase3e-33140
NC_009614:3748950:375560737556073756125519Bacteroides vulgatus ATCC 8482 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase5e-25112
NC_015177:1131173:114429711442971145226930Pedobacter saltans DSM 12145 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 21e-24112
NC_004663:2509433:254439625443962544833438Bacteroides thetaiotaomicron VPI-5482, complete genomeN-acetylmuramoyl-L-alanine amidase6e-24109
NC_009614:3081190:309159730915973092115519Bacteroides vulgatus ATCC 8482 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-23107
NC_009615:1849237:186592118659211866367447Parabacteroides distasonis ATCC 8503 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-22105
NC_009615:644757:650831650831651277447Parabacteroides distasonis ATCC 8503 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-22105
NC_002940:78392:820238202382544522Haemophilus ducreyi 35000HP, complete genomepossible N-acetylmuramoyl-L-alanine amidase1e-22105
NC_009511:4882047:491115849111584911598441Sphingomonas wittichii RW1 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase8e-23105
NC_014034:995661:101142410114241012062639Rhodobacter capsulatus SB1003 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-22103
NC_013132:327743:331484331484331894411Chitinophaga pinensis DSM 2588, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD2e-21101
NC_009615:322107:326278326278326724447Parabacteroides distasonis ATCC 8503 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-21100
NC_014933:510164:560362560362560802441Bacteroides helcogenes P 36-108 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 25e-2199.8
NC_009614:3385187:339374133937413394190450Bacteroides vulgatus ATCC 8482 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-2098.2
NC_006347:3166000:318371231837123184185474Bacteroides fragilis YCH46, complete genomeN-acetylmuramoyl-L-alanine amidase8e-2095.9
NC_014657:914071:932635932635933078444Caldicellulosiruptor owensensis OL chromosome, complete genomen-acetylmuramoyl-l-alanine amidase family 21e-1995.1
NC_014933:2397518:240412324041232404617495Bacteroides helcogenes P 36-108 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 22e-1994.7
NC_016776:2956444:299380429938042994247444Bacteroides fragilis 638R, complete genomeputative N-acetylmuramoyl-L-alanine amidase2e-1994.4
NC_016776:3258939:328244832824483282897450Bacteroides fragilis 638R, complete genomeputative N-acetylmuramoyl-L-alanine amidase3e-1994
NC_003228:3212500:324505032450503245499450Bacteroides fragilis NCTC 9343, complete genomeputative N-acetylmuramoyl-L-alanine amidase3e-1994
NC_020125:194691:201926201926202375450Riemerella anatipestifer RA-CH-2, complete genomeNegative regulator of beta-lactamase expression2e-1890.9
NC_004663:2014035:203165820316582032071414Bacteroides thetaiotaomicron VPI-5482, complete genomeN-acetylmuramoyl-L-alanine amidase5e-1889.7
NC_014033:1062935:107469210746921075111420Prevotella ruminicola 23 chromosome, complete genomeprophage PRU01 N-acetylmuramoyl-L-alanine amidase7e-1889.4
NC_015160:937317:954145954145954609465Odoribacter splanchnicus DSM 20712 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 29e-1682.4
NC_017297:3428429:342931934293193430221903Clostridium botulinum F str. 230613 chromosome, complete genomeputative N-acetylmuramoyl-L-alanine amidase1e-1375.5
NC_009699:3429817:343070734307073431609903Clostridium botulinum F str. Langeland chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1375.5
NC_017068:1216548:1231445123144512326561212Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative phage N-acetylmuramoyl-L-alanine amidase6e-1269.7
NC_017200:1137639:115469711546971155425729Bacillus thuringiensis serovar finitimus YBT-020 chromosome,N-acetylmuramoyl-L-alanine amidase fused to LysM and peptidoglycan binding domain7e-1166.2
NC_014033:103020:134208134208134651444Prevotella ruminicola 23 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase5e-1063.5
NC_016630:1385719:140295814029581403416459Filifactor alocis ATCC 35896 chromosome, complete genomeprophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase1e-0962
NC_012491:3704000:371675937167593717571813Brevibacillus brevis NBRC 100599, complete genomeputative N-acetylmuramoyl-L-alanine amidase3e-0960.8
NC_008554:4586543:460540446054044606270867Syntrophobacter fumaroxidans MPOB, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD7e-0959.7
NC_000907:1568867:157016615701661570441276Haemophilus influenzae Rd KW20, complete genomeN-acetylmuramoyl-L-alanine amidase8e-0752.8
NC_007492:3655545:366675236667523667474723Pseudomonas fluorescens PfO-1, complete genomeAnimal peptidoglycan recognition protein PGRP2e-0651.6