Pre_GI: BLASTP Hits

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Query: NC_002947:2589951:2595114 Pseudomonas putida KT2440, complete genome

Start: 2595114, End: 2597201, Length: 2088

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:1621575:1639085163908516411392055Vibrio cholerae IEC224 chromosome I, complete sequenceDNA primase/helicase2e-139496
NC_009937:4122652:4127616412761641294451830Azorhizobium caulinodans ORS 571, complete genomeDNA polymerase3e-128459
NC_014834:3130715:3169352316935231714362085Rhodopseudomonas palustris DX-1 chromosome, complete genomeDNA-directed DNA polymerase6e-103375
NC_014330:2520906:2539845253984525426402796Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA polymerase I2e-1482
NC_018607:1251357:1272547127254712753242778Brachyspira pilosicoli B2904 chromosome, complete genomeDNA polymerase I2e-1481.6
NC_018604:1489567:1511338151133815141152778Brachyspira pilosicoli WesB complete genomeDNA polymerase I3e-1480.9
NC_007519:3391090:3409221340922134120162796Desulfovibrio alaskensis G20 chromosome, complete genomeDNA polymerase I9e-1479.3
NC_016629:415711:4182324182324208802649Desulfovibrio africanus str. Walvis Bay chromosome, completeDNA polymerase I2e-1378.6
NC_015696:610000:6141616141616168512691Francisella sp. TX077308 chromosome, complete genomeDNA polymerase I4e-1377.4
NC_012997:59407:7455674556772822727Teredinibacter turnerae T7901, complete genomeDNA polymerase I1e-1275.1
NC_008577:4907497:4931315493131549340832769Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA polymerase I5e-1273.6
NC_008321:4631866:4655692465569246584602769Shewanella sp. MR-4, complete genomeDNA polymerase I5e-1273.6
NC_014722:846084:8976038976039003862784Burkholderia rhizoxinica HKI 454, complete genomeDNA polymerase I6e-1273.2
NC_008260:2992813:3005056300505630079262871Alcanivorax borkumensis SK2, complete genomeDNA polymerase I7e-1272.8
NC_007484:580106:5975875975876002982712Nitrosococcus oceani ATCC 19707, complete genomeDNA polymerase A5e-1170.1
NC_013939:1995546:1995546199554619979152370Deferribacter desulfuricans SSM1, complete genomeDNA polymerase I1e-1068.9
NC_014623:6095658:6117477611747761201762700Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDNA polymerase I2e-1068.6
NC_021182:2059143:2078590207859020812022613Clostridium pasteurianum BC1, complete genomeDNA polymerase I3e-1067.8
NC_005085:786851:8025748025748053602787Chromobacterium violaceum ATCC 12472, complete genomeDNA-directed DNA polymerase I3e-1067.8
NC_011661:906583:9081099081099106762568Dictyoglomus turgidum DSM 6724, complete genomeDNA polymerase I8e-1066.2
NC_010410:3166279:3189431318943131922022772Acinetobacter baumannii AYE, complete genome 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease' target='_blank' title='Search database for similar gene annotations'>DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease2e-0965.1
NC_015672:470000:4701754701754725562382Flexistipes sinusarabici DSM 4947 chromosome, complete genomeDNA polymerase I4e-0963.9
NC_012721:2021885:2021885202188520246382754Burkholderia glumae BGR1 chromosome 2, complete genomeDNA polymerase I4e-0963.9
NC_013124:1107202:1123306112330611259662661Acidimicrobium ferrooxidans DSM 10331, complete genomeDNA polymerase I6e-0963.2
NC_016048:2678205:2678205267820526808592655Oscillibacter valericigenes Sjm18-20, complete genomeDNA polymerase I3e-0860.8
NC_003366:2266757:2283149228314922857492601Clostridium perfringens str. 13, complete genomeDNA polymerase I3e-0860.8
NC_008262:2150944:2166242216624221688422601Clostridium perfringens SM101, complete genomeDNA polymerase I6e-0860.1
NC_008261:2481500:2496982249698224995822601Clostridium perfringens ATCC 13124, complete genomeDNA polymerase I7e-0859.7
NC_016940:3632974:3635512363551236382952784Saprospira grandis str. Lewin chromosome, complete genomeDNA polymerase I8e-0859.3
NC_013170:917177:9373659373659400222658Cryptobacterium curtum DSM 15641, complete genomeDNA polymerase I3e-0757.8