Pre_GI: BLASTN Hits

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Query: NC_002947:2589951 Pseudomonas putida KT2440, complete genome

Start: 2589951, End: 2636599, Length: 46649

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004129:4596040*4596040462128225243Pseudomonas fluorescens Pf-5, complete genome01679BLASTN svgBLASTP svg
NC_004578:4204235*4204235422545421220Pseudomonas syringae pv. tomato str. DC3000, complete genome01633BLASTN svgBLASTP svg
NC_021150:2348214*2348214238327335060Azotobacter vinelandii CA6, complete genome0767BLASTN svgBLASTP svg
NC_012560:2348202*2348202238326135060Azotobacter vinelandii DJ, complete genome0767BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome0678BLASTN svgBLASTP svg
NC_015410:2505168*2505168253404528878Pseudomonas mendocina NK-01 chromosome, complete genome9e-85323BLASTN svgBLASTP svg
NC_002927:23385492338549238749248944Bordetella bronchiseptica RB50, complete genome4e-81311BLASTN svgBLASTP svg
NC_010524:2761394*2761394278436822975Leptothrix cholodnii SP-6, complete genome5e-74287BLASTN svgBLASTP svg
NC_007298:1824335*1824335184843524101Dechloromonas aromatica RCB, complete genome1e-71280BLASTN svgBLASTP svg
NC_008570:2216736*2216736227194055205Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-69272BLASTN svgBLASTP svg
NC_010172:2722000*2722000274449822499Methylobacterium extorquens PA1, complete genome3e-66262BLASTN svgBLASTP svg
NC_008702:2259430*2259430228338423955Azoarcus sp. BH72, complete genome3e-63252BLASTN svgBLASTP svg
NC_010645:15238671523867154936425498Bordetella avium 197N, complete genome7e-58234BLASTN svgBLASTP svg
NC_003919:1203405*1203405123359930195Xanthomonas axonopodis pv. citri str. 306, complete genome6e-46194BLASTN svgBLASTP svg
NC_011992:1179084*1179084120383024747Acidovorax ebreus TPSY, complete genome3e-38168BLASTN svgBLASTP svg
NC_008782:1277117*1277117129923122115Acidovorax sp. JS42, complete genome3e-38168BLASTN svgBLASTP svg
NC_007645:2204066*2204066222275718692Hahella chejuensis KCTC 2396, complete genome1e-34157BLASTN svgBLASTP svg
NC_020126:2883194*2883194290469121498Myxococcus stipitatus DSM 14675, complete genome5e-34155BLASTN svgBLASTP svg
NC_015671:2371632*2371632239461522984Cellvibrio gilvus ATCC 13127 chromosome, complete genome5e-31145BLASTN svgBLASTP svg
NC_010424:1563033*1563033159550932477Candidatus Desulforudis audaxviator MP104C, complete genome7e-30141BLASTN svgBLASTP svg
NC_002488:1099975*1099975114540245428Xylella fastidiosa 9a5c, complete genome1e-25127BLASTN svgBLASTP svg
NC_015410:2351464*2351464238751136048Pseudomonas mendocina NK-01 chromosome, complete genome4e-25125BLASTN svgBLASTP svg
NC_007760:3848190*3848190387276224573Anaeromyxobacter dehalogenans 2CP-C, complete genome2e-24123BLASTN svgBLASTP svg
NC_003888:2814360*2814360285868544326Streptomyces coelicolor A3(2), complete genome2e-24123BLASTN svgBLASTP svg
NC_014844:2028666*2028666205226323598Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome4e-22115BLASTN svgBLASTP svg
NC_010995:2312901*2312901233336120461Cellvibrio japonicus Ueda107, complete genome4e-22115BLASTN svgBLASTP svg
NC_021177:2451000*2451000247327922280Streptomyces fulvissimus DSM 40593, complete genome2e-21113BLASTN svgBLASTP svg
NC_013851:2317091*2317091233893321843Allochromatium vinosum DSM 180 chromosome, complete genome7e-21111BLASTN svgBLASTP svg
NC_013204:2234860*2234860226359928740Eggerthella lenta DSM 2243, complete genome2e-18103BLASTN svgBLASTP svg
NC_007712:4067500*4067500409105923560Sodalis glossinidius str. 'morsitans', complete genome2e-18103BLASTN svgBLASTP svg
NC_004556:531000*53100056678535786Xylella fastidiosa Temecula1, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_010577:530917*53091756659335677Xylella fastidiosa M23, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_015573:77620977620980469328485Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_012559:978419*978419100401325595Laribacter hongkongensis HLHK9, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_019815:782987*78298780605323067Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei2e-1489.7BLASTN svgBLASTP svg
NC_015711:6796082*6796082684217246091Myxococcus fulvus HW-1 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_013093:1213908*1213908124337529468Actinosynnema mirum DSM 43827, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_003116:1488576*1488576150859920024Neisseria meningitidis Z2491, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_002937:1395977*1395977141908123105Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete1e-1387.7BLASTN svgBLASTP svg
NC_005061:647567*64756767214524579Candidatus Blochmannia floridanus, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_008095:4858117*4858117490039542279Myxococcus xanthus DK 1622, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_009654:4253431*4253431427667923249Marinomonas sp. MWYL1, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_015422:3366500*3366500339127624777Alicycliphilus denitrificans K601 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_013446:1889500*1889500191816228663Comamonas testosteroni CNB-2, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_012691:2050957*2050957206859917643Tolumonas auensis DSM 9187, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_002946:618439*61843964067022232Neisseria gonorrhoeae FA 1090, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_002939:1926084*1926084196150735424Geobacter sulfurreducens PCA, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_012968:239476*23947626753528060Methylotenera mobilis JLW8, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_020126:4974877*4974877500016825292Myxococcus stipitatus DSM 14675, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_007759:1571425*1571425160128029856Syntrophus aciditrophicus SB, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014210:40530944053094407559922506Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-1179.8BLASTN svgBLASTP svg
NC_014909:662500*66250068970227203Candidatus Blochmannia vafer str. BVAF chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_015222:2475792*2475792249670020909Nitrosomonas sp. AL212 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_019673:1420198*1420198144786527668Saccharothrix espanaensis DSM 44229 complete genome2e-1179.8BLASTN svgBLASTP svg
NC_020299:149118*14911816889819781Candidatus Kinetoplastibacterium oncopeltii TCC290E, complete2e-1179.8BLASTN svgBLASTP svg
NC_014394:1658357*1658357168283924483Gallionella capsiferriformans ES-2 chromosome, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_008570:2014151*2014151204014925999Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_007973:2150962*2150962217292621965Ralstonia metallidurans CH34 chromosome 1, complete sequence4e-1075.8BLASTN svgBLASTP svg
NC_008060:1182378*1182378120591323536Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence4e-1075.8BLASTN svgBLASTP svg
NC_008542:1727000*1727000174809921100Burkholderia cenocepacia HI2424 chromosome 1, complete sequence4e-1075.8BLASTN svgBLASTP svg
NC_008782:2781229*2781229280258121353Acidovorax sp. JS42, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_009937:4122652*4122652415024227591Azorhizobium caulinodans ORS 571, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_010508:1705500*1705500172769222193Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence4e-1075.8BLASTN svgBLASTP svg
NC_011992:1234610*1234610125759922990Acidovorax ebreus TPSY, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_013740:571879*57187959737325495Acidaminococcus fermentans DSM 20731, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_009937:4090404*4090404411705426651Azorhizobium caulinodans ORS 571, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007517:2055305*2055305208871433410Geobacter metallireducens GS-15, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008278:1876435*1876435189875422320Frankia alni ACN14a, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_008025:430487*43048745748426998Deinococcus geothermalis DSM 11300, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_015275:566000*56600059144025441Clostridium lentocellum DSM 5427 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015856:3912195*3912195394272630532Collimonas fungivorans Ter331 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_019673:77976667797666782158623921Saccharothrix espanaensis DSM 44229 complete genome2e-0869.9BLASTN svgBLASTP svg
NC_016048:3983500*3983500400235618857Oscillibacter valericigenes Sjm18-20, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_014815:841484*84148489809956616Micromonospora sp. L5 chromosome, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_014391:621062*62106264468923628Micromonospora aurantiaca ATCC 27029 chromosome, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_011768:1889853*1889853190959819746Desulfatibacillum alkenivorans AK-01, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_008578:1827605*1827605185916131557Acidothermus cellulolyticus 11B, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015311:29428329428331483720555Prevotella denticola F0289 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010520:3526883*3526883355123524353Clostridium botulinum A3 str. Loch Maree, complete genome5e-0661.9BLASTN svgBLASTP svg