Pre_GI: BLASTP Hits

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Query: NC_017218:1655009:1662727 Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome

Start: 1662727, End: 1663416, Length: 690

Host Lineage: Bifidobacterium breve; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is one of the first colonizers of the human gastrointestinal tract, and is a dominant member of the adult intestinal microbial community. Probiotics are live microbial supplements which benefit the health of an animal by maintaining normal microbial flora, producing vitamins, and stimulating the mucosal immune system




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008618:1456000:146361714636171464294678Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein9e-95346
NC_016584:1912000:192439619243961925067672Desulfosporosinus orientis DSM 765 chromosome, complete genomeCRISPR-associated protein Cas42e-73275
NC_013204:2305140:231387323138732314535663Eggerthella lenta DSM 2243, complete genomeCRISPR-associated protein Cas44e-67254
NC_014960:1380500:138560813856081386276669Anaerolinea thermophila UNI-1, complete genomehypothetical protein3e-63241
NC_009523:5438000:544352354435235444191669Roseiflexus sp. RS-1 chromosome, complete genomeCRISPR-associated Cas4 family protein3e-61234
NC_010610:1385066:139522013952201395876657Lactobacillus fermentum IFO 3956, complete genomehypothetical protein1e-58225
NC_013740:842841:880032880032880706675Acidaminococcus fermentans DSM 20731, complete genomeCRISPR-associated protein Cas43e-55214
NC_021175:353292:362609362609363280672Streptococcus oligofermentans AS 1.3089, complete genomeCRISPR-associated protein Cas47e-50197
NC_012470:1606000:160758116075811608252672Streptococcus equi subsp. zooepidemicus, complete genomeCRISPR-associated protein Cas49e-49193
NC_007759:2748000:275452927545292755203675Syntrophus aciditrophicus SB, complete genomerecB family exonuclease N1e-48192
NC_016630:28410:392773927739930654Filifactor alocis ATCC 35896 chromosome, complete genomeCRISPR-associated protein Cas45e-48191
NC_019968:8397:190811908119758678Prevotella dentalis DSM 3688 chromosome 2, complete sequenceCRISPR-associated protein Cas43e-46185
NC_007512:1459685:147104914710491471693645Pelodictyon luteolum DSM 273, complete genomeProtein of unknown function DUF833e-46184
NC_014933:3637172:365940536594053660073669Bacteroides helcogenes P 36-108 chromosome, complete genomeCRISPR-associated exonuclease, Cas4 family8e-46183
NC_009337:1448607:145920914592091459868660Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeCRISPR-associated exonuclease Cas4 family protein3e-45181
NC_009615:1354122:137826413782641378929666Parabacteroides distasonis ATCC 8503 chromosome, complete genomerecombinase B4e-45181
NC_011060:1746000:175990817599081760552645Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated protein Cas45e-44177
NC_016012:665171:668557668557669213657Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeCRISPR-associated exonuclease, Cas4 family3e-43174
NC_007947:621213:630452630452631102651Methylobacillus flagellatus KT, complete genomeCRISPR-associated protein Cas47e-41167
NC_014221:1786122:180309718030971803741645Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein Cas44e-40164
NC_005085:1269787:129117912911791291805627Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein7e-39160
NC_015976:1893076:191355319135531914212660Sphingobium sp. SYK-6, complete genomeCRISPR-associated protein Cas43e-38158
NC_008741:15699:341113411134749639Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,CRISPR-associated protein Cas41e-37156
NC_020126:9726992:973460897346089735252645Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated Cas4 family protein1e-36152
NC_017511:602000:613710613710614360651Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomerecombinase B7e-36150
NC_014364:1116439:112614311261431126787645Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCRISPR-associated protein Cas41e-34146
NC_011963:1979136:199286619928661993471606Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceCRISPR-associated exonuclease, Cas4 family6e-34144
NC_015677:3685452:369722236972223697851630Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein6e-33140
NC_010995:2798000:280377028037702804402633Cellvibrio japonicus Ueda107, complete genomeCRISPR-associated protein Cas49e-33140
NC_006513:1949751:195508919550891955721633Azoarcus sp. EbN1, complete genomepredicted RecB family exonuclease protein1e-32139
NC_015387:261799:271963271963272541579Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas45e-30130
NC_014484:447889:458952458952459590639Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein5e-27121
NC_007777:3962000:396910939691093969774666Frankia sp. CcI3, complete genomeCRISPR-associated protein Cas41e-25116
NC_013502:102430:1225601225601242211662Rhodothermus marinus DSM 4252 plasmid pRMAR01, complete sequenceCRISPR-associated protein Cas19e-1477
NC_002939:47406:7263072630743091680Geobacter sulfurreducens PCA, complete genomeCRISPR-associated protein Cas1/Cas47e-1270.9
NC_014215:421683:4441674441674457681602Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,CRISPR-associated protein Cas1/Cas44e-1065.1
NC_017511:602000:616095616095616310216Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative phage associated protein1e-0963.2
NC_015954:189000:196061196061196654594Halophilic archaeon DL31 chromosome, complete genomeCRISPR-associated protein Cas48e-0960.5
NC_016906:3980122:3984422398442239860771656Gordonia polyisoprenivorans VH2 chromosome, complete genomeCRISPR-associated protein, Cas1/Cas49e-0960.5
NC_014643:2354507:236087923608792361685807Rothia dentocariosa ATCC 17931 chromosome, complete genomehypothetical protein3e-0755.5
NC_020126:10091703:1009895710098957101006121656Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated Cas1 family protein5e-0754.7