Pre_GI: BLASTP Hits

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Query: NC_017216:22454:30545 Bifidobacterium animalis subsp. lactis BLC1, complete genome

Start: 30545, End: 30781, Length: 237

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011835:23204:306313063130945315Bifidobacterium animalis subsp. lactis AD011 chromosome, completeZn-ribbon protein5e-41166
NC_017217:23000:306783067830914237Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein2e-40164
NC_012814:23000:306783067830914237Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein2e-40164
NC_012815:23000:306783067830914237Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein2e-40164
NC_007498:3399478:341979534197953420028234Pelobacter carbinolicus DSM 2380, complete genomeZn-ribbon protein3e-0857
NC_014220:1670000:168167616816761682248573Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomehypothetical protein5e-0856.2