Some Help

Query: NC_017154:2901300:2919996 Yersinia pestis D106004 chromosome, complete genome

Start: 2919996, End: 2920331, Length: 336

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008150:2599661:261835626183562618691336Yersinia pestis Antiqua, complete genomeadrenodoxin family ferredoxin2e-59227
NC_012559:2752825:276650927665092766847339Laribacter hongkongensis HLHK9, complete genomeFdx28e-43172
NC_011992:1179084:119297611929761193314339Acidovorax ebreus TPSY, complete genomeferredoxin, 2Fe-2S type, ISC system8e-37152
NC_008786:2687688:269066226906622691000339Verminephrobacter eiseniae EF01-2, complete genomeferredoxin, 2Fe-2S type, ISC system1e-29128
NC_008576:3812500:382446138244613824793333Magnetococcus sp. MC-1, complete genomeferredoxin2e-1994.4
NC_007797:692944:699861699861700211351Anaplasma phagocytophilum HZ, complete genomeiron-sulfur cluster-binding protein1e-1478.6
NC_011026:2624775:262940126294012629760360Chloroherpeton thalassium ATCC 35110, complete genomeferredoxin5e-1476.6
NC_008095:6253610:625694762569476257324378Myxococcus xanthus DK 1622, complete genomeputative 2Fe-2S cluster assembly ferredoxin6e-1475.9
NC_012416:852000:873712873712874059348Wolbachia sp. wRi, complete genomeferredoxin, iron-sulfur cluster assembly system4e-1373.6
NC_007109:1105251:112622311262231126561339Rickettsia felis URRWXCal2, complete genomeFerredoxin2e-1167.8
NC_010162:10208521:102276261022762610227982357Sorangium cellulosum 'So ce 56', complete genomeputative ferredoxin, 2Fe-2S3e-1167.4
NC_015520:224136:240843240843241139297Mahella australiensis 50-1 BON chromosome, complete genomeferredoxin3e-1167.4
NC_002696:3759551:377252637725263772846321Caulobacter crescentus CB15, complete genomeferredoxin, 2Fe-2S3e-1167
NC_014100:172452:179034179034179354321Caulobacter segnis ATCC 21756 chromosome, complete genomeferredoxin8e-1165.9
NC_016026:2082500:208376320837632084104342Micavibrio aeruginosavorus ARL-13 chromosome, complete genome2Fe-2S iron-sulfur cluster binding domain-containing protein9e-1062.4
NC_016147:2964178:297148029714802971800321Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeferredoxin3e-0857
NC_016604:3137694:313977031397703140093324Mycobacterium rhodesiae NBB3 chromosome, complete genomeferredoxin2e-0754.7
NC_013856:189768:190642190642190962321Azospirillum sp. B510 plasmid pAB510b, complete sequence2Fe-2S ferredoxin2e-0650.8