Some Help

Query: NC_016945:666000 Vibrio cholerae IEC224 chromosome II, complete sequence

Start: 666000, End: 689434, Length: 23435

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013592:45114784511478453986728390Dickeya dadantii Ech586, complete genome3e-24121BLASTN svgBLASTP svg
NC_010506:49515004951500497315021651Shewanella woodyi ATCC 51908, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013421:16311416311418959926486Pectobacterium wasabiae WPP163, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_015977:57725557725560009922845Roseburia hominis A2-183 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_002505:23856923856927414635578Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete5e-1177.8BLASTN svgBLASTP svg
NC_012779:36527373652737367609923363Edwardsiella ictaluri 93-146, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014654:1*12910529105Halanaerobium sp. 'sapolanicus' chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013946:415028*41502844572730700Meiothermus ruber DSM 1279 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010725:3917369*3917369396168844320Methylobacterium populi BJ001, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005140:96026196026198150721247Vibrio vulnificus YJ016 chromosome II, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_015633:46114346114348763326491Vibrio anguillarum 775 chromosome chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg