Query: NC_016830:4295831 Pseudomonas fluorescens F113 chromosome, complete genome
Start: 4295831, End: 4318219, Length: 22389
Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015733:1793399* | 1793399 | 1818021 | 24623 | Pseudomonas putida S16 chromosome, complete genome | 3e-169 | 603 | BLASTN svg | BLASTP svg |
NC_015379:908904 | 908904 | 971106 | 62203 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_015379:4249238 | 4249238 | 4275626 | 26389 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_015379:89441* | 89441 | 117816 | 28376 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015379:6023926 | 6023926 | 6047280 | 23355 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015379:1151143* | 1151143 | 1182795 | 31653 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_016002:1975000* | 1975000 | 2024947 | 49948 | Pseudogulbenkiania sp. NH8B, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_012660:1737423* | 1737423 | 1766164 | 28742 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015379:1600715* | 1600715 | 1626824 | 26110 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_012660:3689223* | 3689223 | 3716587 | 27365 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013855:558831* | 558831 | 581099 | 22269 | Azospirillum sp. B510 plasmid pAB510a, complete sequence | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |