Pre_GI: BLASTN Hits

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Query: NC_016830:4295831 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4295831, End: 4318219, Length: 22389

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015733:1793399*1793399181802124623Pseudomonas putida S16 chromosome, complete genome3e-169603BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-1487.7BLASTN svgBLASTP svg
NC_015379:42492384249238427562626389Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-1281.8BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-1177.8BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-1177.8BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-1075.8BLASTN svgBLASTP svg
NC_016002:1975000*1975000202494749948Pseudogulbenkiania sp. NH8B, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015379:1600715*1600715162682426110Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-0867.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013855:558831*55883158109922269Azospirillum sp. B510 plasmid pAB510a, complete sequence3e-0661.9BLASTN svgBLASTP svg