Pre_GI: BLASTP Hits

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Query: NC_016582:4874500:4874877 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 4874877, End: 4875791, Length: 915

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013947:1363078:137829613782961379210915Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehomoserine kinase3e-44179
NC_006087:676318:689787689787690758972Leifsonia xyli subsp. xyli str. CTCB07, complete genomehomoserine kinase8e-38157
NC_016932:832748:874429874429875352924Corynebacterium pseudotuberculosis 316 chromosome, complete genomeHomoserine kinase4e-30132
NC_014329:844622:886318886318887241924Corynebacterium pseudotuberculosis FRC41 chromosome, completehomoserine kinase4e-30132
NC_016781:844613:886309886309887232924Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeHomoserine kinase4e-30132
NC_017031:863093:886154886154887077924Corynebacterium pseudotuberculosis P54B96 chromosome, completeHomoserine kinase4e-30132
NC_017301:863500:885933885933886856924Corynebacterium pseudotuberculosis C231 chromosome, completeHomoserine kinase4e-30132
NC_017303:863060:886129886129887052924Corynebacterium pseudotuberculosis I19 chromosome, complete genomeHomoserine kinase4e-30132
NC_017305:863072:886138886138887061924Corynebacterium pseudotuberculosis PAT10 chromosome, completeHomoserine kinase4e-30132
NC_014410:2609588:262181026218102622715906Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,homoserine kinase9e-25114
NC_015555:2359000:237135623713562372261906Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeHomoserine kinase2e-21103
NC_014152:2181360:218405421840542184962909Thermincola sp. JR, complete genomehomoserine kinase9e-21100
NC_004557:2475030:249713124971312498042912Clostridium tetani E88, complete genomehomoserine kinase4e-2099
NC_016630:1385719:139504713950471395946900Filifactor alocis ATCC 35896 chromosome, complete genomehomoserine kinase2e-1997.1
NC_009633:587562:593504593504594400897Alkaliphilus metalliredigens QYMF chromosome, complete genomehomoserine kinase1e-1790.5
NC_009495:1759759:178032017803201781213894Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehomoserine kinase7e-1581.3
NC_014166:455378:464132464132465013882Arcobacter nitrofigilis DSM 7299 chromosome, complete genomehomoserine kinase2e-1480.1
NC_014831:2082304:2085907208590720869861080Thermaerobacter marianensis DSM 12885 chromosome, complete genomehomoserine kinase3e-1479.3
NC_016584:3645245:366303536630353663937903Desulfosporosinus orientis DSM 765 chromosome, complete genomehomoserine kinase4e-1479
NC_015161:162000:162893162893163807915Deinococcus proteolyticus MRP chromosome, complete genomeHomoserine kinase8e-1477.8
NC_017187:1923733:192373319237331924614882Arcobacter butzleri ED-1, complete genomehomoserine kinase4e-1375.5
NC_014958:629459:634350634350635258909Deinococcus maricopensis DSM 21211 chromosome, complete genomeHomoserine kinase3e-1272.8
NC_012526:131000:139076139076140023948Deinococcus deserti VCD115, complete genomeputative Homoserine kinase6e-1168.2
NC_014479:3079855:310161131016113102540930Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehomoserine kinase2e-1066.6
NC_015687:1377367:137930013793001380190891Clostridium acetobutylicum DSM 1731 chromosome, complete genomehomoserine kinase6e-1065.1
NC_017295:1375180:137711313771131378003891Clostridium acetobutylicum EA 2018 chromosome, complete genomeHomoserine kinase (thrB)5e-0962
NC_003030:1375764:137769713776971378587891Clostridium acetobutylicum ATCC 824, complete genomeHomoserine kinase (thrB)5e-0962