Pre_GI: BLASTP Hits

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Query: NC_014169:515957:517403 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 517403, End: 518818, Length: 1416

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015067:998500:9995799995791000544966Bifidobacterium longum subsp. longum JCM 1217, complete genomephage integrase0646
NC_015052:471944:4719444719444737071764Bifidobacterium longum subsp. infantis 157F, complete genomephage integrase3e-123442
NC_015052:471944:497684497684498466783Bifidobacterium longum subsp. infantis 157F, complete genomephage integrase1e-122439
NC_020302:85821:127801127801128760960Corynebacterium halotolerans YIM 70093 = DSM 44683, completeintegrase/recombinase1e-85317
NC_020302:2219378:224120022412002242159960Corynebacterium halotolerans YIM 70093 = DSM 44683, completeintegrase/recombinase1e-85317
NC_015172:50782:498214982150789969Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeintegrase family protein1e-29131
NC_016633:1798758:180041718004171801379963Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomesite-specific recombinase XerD1e-28127
NC_014376:3009403:303137530313753032358984Clostridium saccharolyticum WM1 chromosome, complete genomeintegrase family protein1e-24115
NC_014098:2809689:281710528171052818085981Bacillus tusciae DSM 2912 chromosome, complete genomeintegrase family protein6e-23108
NC_010337:591264:609088609088610074987Heliobacterium modesticaldum Ice1, complete genomephage integrase1e-22108
NC_011662:386162:420035420035420967933Thauera sp. MZ1T, complete genomeintegrase family protein1e-22107
NC_018867:1303287:130571013057101306696987Dehalobacter sp. CF chromosome, complete genomeputative integrase/recombinase3e-22107
NC_018866:1224748:122717112271711228157987Dehalobacter sp. DCA chromosome, complete genomeputative integrase/recombinase3e-22107
NC_010571:5650806:565354456535445654536993Opitutus terrae PB90-1, complete genomeintegrase family protein2e-21104
NC_002678:4859111:488133848813384882276939Mesorhizobium loti MAFF303099, complete genomeintegrase/recombinase6e-21102
NC_010084:2484000:249443324944332495347915Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein2e-1894.4
NC_010804:996837:102940810294081030340933Burkholderia multivorans ATCC 17616 chromosome 1, completeputative integrase/recombinase for integrative and conjugative element2e-1894.4
NC_016626:1699500:170405317040531705045993Burkholderia sp. YI23 plasmid byi_1p, complete sequencephage integrase2e-1894
NC_016589:183432:197647197647198639993Burkholderia sp. YI23 chromosome 1, complete sequencephage integrase2e-1894
NC_010524:824145:829128829128830108981Leptothrix cholodnii SP-6, complete genomeintegrase family protein4e-1893.2
NC_010338:2136193:215249321524932153434942Caulobacter sp. K31, complete genomeintegrase family protein5e-1892.8
NC_014825:165701:168740168740169720981Ruminococcus albus 7 plasmid pRUMAL02, complete sequenceintegrase family protein4e-1789.7
NC_015580:2444845:2446071244607124474381368Novosphingobium sp. PP1Y, complete genomeintegrase/recombinase6e-1789.4
NC_010170:1498253:150698715069871507982996Bordetella petrii, complete genomeintegrase/recombinase2e-1687.4
NC_010170:1324758:136654913665491367544996Bordetella petrii, complete genomeintegrase/recombinase2e-1687.4
NC_010170:1103224:110882711088271109822996Bordetella petrii, complete genomeintegrase/recombinase2e-1687.4
NC_011283:1811000:183512818351281836054927Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase3e-1583.6
NC_010524:824145:8388328388328398331002Leptothrix cholodnii SP-6, complete genomeintegrase family protein3e-1583.6
NC_015730:3693391:3711416371141637125821167Roseobacter litoralis Och 149 chromosome, complete genome4e-1583.2
NC_015730:1107840:1130750113075011321141365Roseobacter litoralis Och 149 chromosome, complete genomeputative phage integrase6e-1582.8
NC_006824:109735:126174126174127148975Azoarcus sp. EbN1 plasmid 2, complete sequenceputative integrase2e-1480.5
NC_015580:293803:329904329904330815912Novosphingobium sp. PP1Y, complete genomephage integrase7e-1479
NC_015942:2316354:232155623215562322533978Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein8e-1479
NC_011761:2131911:214539821453982146339942Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completesite-specific recombinase, phage integrase family1e-1377.8
NC_011206:2019577:203343920334392034380942Acidithiobacillus ferrooxidans ATCC 53993, complete genomeintegrase family protein1e-1377.8
NC_008726:6335961:633503263350326335964933Mycobacterium vanbaalenii PYR-1, complete genomephage integrase family protein3e-1377
NC_006513:286549:285575285575286552978Azoarcus sp. EbN1, complete genomephage-related integrase6e-1375.9
NC_010625:1602191:1602191160219116090746884Burkholderia phymatum STM815 plasmid pBPHY01, complete sequence8e-1375.5
NC_016631:3917253:393923239392323940197966Granulicella mallensis MP5ACTX8 chromosome, complete genomeintegrase family protein1e-1274.7
NC_010625:1602191:160404216040421605019978Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceintegrase family protein4e-1273.2
NC_010623:1961685:197758719775871978537951Burkholderia phymatum STM815 chromosome 2, complete sequenceintegrase family protein3e-1066.6
NC_019904:5207309:520633352063335207316984Echinicola vietnamensis DSM 17526 chromosome, complete genomesite-specific recombinase XerD2e-0964.3
NC_003296:87313:9879598795998381044Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completetyrosine recombinase4e-0963.2
NC_014814:4326500:4331708433170843327901083Mycobacterium sp. Spyr1 chromosome, complete genomesite-specific recombinase XerD9e-0962
NC_009338:4913510:4943570494357049446521083Mycobacterium gilvum PYR-GCK chromosome, complete genomephage integrase family protein9e-0962
NC_012472:4867210:489589848958984896866969Bacillus cereus 03BB102, complete genomesite-specific recombinase, phage integrase family8e-0858.9
NC_008726:1175999:1183143118314311842371095Mycobacterium vanbaalenii PYR-1, complete genomephage integrase family protein9e-0858.9
NC_019904:5207309:5207309520730952085771269Echinicola vietnamensis DSM 17526 chromosome, complete genomesite-specific recombinase XerD2e-0757.4
NC_013926:614206:629210629210630064855Aciduliprofundum boonei T469 chromosome, complete genomeintegrase family protein7e-0755.8
NC_005126:4333767:4349381434938143505111131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase5e-0653.1
NC_005126:4333767:4359526435952643606561131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase5e-0653.1
NC_005126:4210500:4220710422071042218401131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase4e-0653.1
NC_005126:4210500:4229578422957842307081131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase4e-0653.1
NC_002947:5961096:596390259639025964801900Pseudomonas putida KT2440, complete genometyrosine recombinase4e-0653.1
NC_005126:4333767:4342031434203143431431113Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase5e-0652.8
NC_005126:1265071:1304929130492913060411113Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase5e-0652.8
NC_002678:4859111:488002448800244880245222Mesorhizobium loti MAFF303099, complete genomeintegrase/recombinase9e-0652