Pre_GI: BLASTP Hits

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Query: NC_013941:1014386:1025624 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Start: 1025624, End: 1026322, Length: 699

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011601:1077548:108784510878451088543699Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS secreted effector NleD-like protein4e-126450
NC_013008:918215:933552933552934250699Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector1e-124445
NC_002695:917509:928594928594929292699Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-124445
NC_002655:919654:930245930245930943699Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933K1e-123442
NC_007005:2149275:216058421605842161180597Pseudomonas syringae pv. syringae B728a, complete genometype III effector HopAP16e-0754.7