Pre_GI: BLASTP Hits

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Query: NC_013929:3600343:3626442 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 3626442, End: 3626933, Length: 492

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016113:11500:312023120231861660Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencetranscriptional regulator1e-0652.8
NC_013947:4363250:436791043679104368308399Stackebrandtia nassauensis DSM 44728 chromosome, complete genome3e-0650.8
NC_016109:785819:805566805566806267702Kitasatospora setae KM-6054, complete genomeputative two-component system response regulator4e-0650.8
NC_016582:6811273:681717068171706817877708Streptomyces bingchenggensis BCW-1 chromosome, complete genometwo component LuxR family transcriptional regulator5e-0650.4
NC_013093:2633000:266768826676882668353666Actinosynnema mirum DSM 43827, complete genometwo component transcriptional regulator, LuxR family8e-0649.7