Pre_GI: BLASTP Hits

Some Help

Query: NC_013595:4951396:4965044 Streptosporangium roseum DSM 43021, complete genome

Start: 4965044, End: 4965529, Length: 486

Host Lineage: Streptosporangium roseum; Streptosporangium; Streptosporangiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolation: Vegetable garden soil; Temp: Mesophile; Temp: 28C; Habitat: Soil. This organism is a common soil bacterium. An aerobic Gram-positive bacterium isolated from vegetable garden soil in 1955.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011992:1318691:131869113186911319206516Acidovorax ebreus TPSY, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0649.3
NC_013093:2230171:223517522351752235852678Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0650.1
NC_014910:2015627:201649420164942017018525Alicycliphilus denitrificans BC chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0858.9
NC_011725:1032500:104531410453141045847534Bacillus cereus B4264 chromosome, complete genomeRNA polymerase factor sigma C3e-0754.7
NC_006350:1938631:196639319663931966929537Burkholderia pseudomallei K96243 chromosome 1, complete sequenceRNA polymerase sigma-70 factor5e-0650.4
NC_016627:4323370:436892043689204369462543Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-1271.6
NC_017030:9818064:981751098175109818067558Corallococcus coralloides DSM 2259 chromosome, complete genomeECF subfamily RNA polymerase sigma factor8e-0752.8
NC_016799:267310:284174284174284740567Corynebacterium diphtheriae 31A chromosome, complete genomeECF family sigma factor C3e-0651.2
NC_016802:221343:238193238193238759567Corynebacterium diphtheriae HC02 chromosome, complete genomeECF-family sigma factor C3e-0650.8
NC_016783:201066:218683218683219249567Corynebacterium diphtheriae INCA 402 chromosome, complete genomeECF-family sigma factor C3e-0651.2
NC_011830:3369282:338259733825973383103507Desulfitobacterium hafniense DCB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0652.4
NC_007907:2306561:230812823081282308652525Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0651.2
NC_015589:2019370:202926920292692029814546Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor8e-0856.2
NC_008278:132000:146785146785147303519Frankia alni ACN14a, complete genomePutative RNA polymerase ECF-subfamily sigma factor3e-42170
NC_007777:2964500:298966629896662990505840Frankia sp. CcI3, complete genomesigma-248e-0752.8
NC_015656:632960:640915640915641499585Frankia symbiont of Datisca glomerata chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0652
NC_016906:4123000:413998141399814140532552Gordonia polyisoprenivorans VH2 chromosome, complete genomeRNA polymerase sigma factor4e-0650.4
NC_016906:1458158:147173414717341472315582Gordonia polyisoprenivorans VH2 chromosome, complete genomesigma-70 family RNA polymerase sigma factor7e-0753.1
NC_013169:612456:641378641378641875498Kytococcus sedentarius DSM 20547, complete genomeRNA polymerase sigma factor, sigma-70 family4e-47186
NC_010172:1522707:154378715437871544350564Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor, sigma-70 family2e-0651.6
NC_011894:2811573:282499228249922825498507Methylobacterium nodulans ORS 2060, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0753.1
NC_017955:3731480:383478738347873835308522Modestobacter marinus, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0857.8
NC_009077:2308634:230980423098042310280477Mycobacterium sp. JLS, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-48191
NC_014814:3364336:337963933796393380121483Mycobacterium sp. Spyr1 chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family2e-45181
NC_014033:1664500:168220716822071682704498Prevotella ruminicola 23 chromosome, complete genomeECF family RNA polymerase sigma-70 factor1e-0755.8
NC_009050:604950:619640619640620254615Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily9e-0649.3
NC_009142:267550:269255269255269797543Saccharopolyspora erythraea NRRL 2338, complete genomeRNA polymerase sigma-70 factor, ECF family9e-0752.8
NC_019673:3041936:304282330428233043461639Saccharothrix espanaensis DSM 44229 complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.1
NC_007677:241846:245884245884246468585Salinibacter ruber DSM 13855, complete genomepossible sigma-70 factor, ECF subfamily, putative7e-0753.1
NC_014032:269844:274798274798275382585Salinibacter ruber M8 chromosome, complete genomeRNA polymerase sigma factor7e-0753.1
NC_019892:3086493:3099373309937331026813309Singulisphaera acidiphila DSM 18658 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0858.9
NC_013730:2490000:249877424987742499262489Spirosoma linguale DSM 74, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0960.1
NC_016582:10159486:101755861017558610176125540Streptomyces bingchenggensis BCW-1 chromosome, complete genomeECF subfamily RNA polymerase sigma factor6e-0650.1
NC_018750:3481476:348147634814763482261786Streptomyces venezuelae ATCC 10712, complete genomeputative RNA polymerase ECF-subfamily sigma factor1e-0755.5
NC_018750:3964784:398322139832213983961741Streptomyces venezuelae ATCC 10712, complete genomeRNA polymerase sigma-70 factor3e-0651.2
NC_015957:2678544:269069026906902691253564Streptomyces violaceusniger Tu 4113 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0651.2
NC_011901:491783:492538492538493095558Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeECF subfamily RNA polymerase sigma-24 subunit2e-0651.6
NC_015144:1576047:158985115898511590342492Weeksella virosa DSM 16922 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0960.8