Pre_GI: BLASTP Hits

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Query: NC_013508:275081:292753 Edwardsiella tarda EIB202, complete genome

Start: 292753, End: 293199, Length: 447

Host Lineage: Edwardsiella tarda; Edwardsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Edwardsiella tarda is a Gram-negative member of the normal gut microflora of fish, humans, chickens and other animals. This organism is also a serious pathogen of marine and freshwater fish and has been isolated from channel catfish, Japanese eels, flounder, tilapia, and other economically important fish. Infection by this organism is characterized by septicemia, internal abscesses, and skin lesions. This disease is often associated with poor water quality and mortality in aquaculture can be high. Edwardsiella tarda also causes opportunistic infections in humans, most commonly gastroenteritis and wound infections. However, this organism has been isolated from cases of septicemia and meningitis, primarily in immunocompromised patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:261438:275788275788276225438Edwardsiella ictaluri 93-146, complete genomenickel-responsive transcriptional regulator NikR, putative3e-56216
NC_012912:242709:263936263936264355420Dickeya zeae Ech1591, complete genometranscriptional regulator NikR, CopG family6e-23106
NC_008340:2272692:228003322800332280452420Alkalilimnicola ehrlichei MLHE-1, complete genomeputative transcriptional regulator, CopG family2e-2097.8
NC_004741:4160500:418449041844904184891402Shigella flexneri 2a str. 2457T, complete genomenickel responsive regulator3e-1890.5
NC_011146:4070000:407565140756514076070420Geobacter bemidjiensis Bem, complete genomeputative transcriptional regulator, CopG family3e-1477.4
NC_010510:310938:327484327484327945462Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeputative transcriptional regulator, CopG family5e-1269.7
NC_019978:315346:320567320567320980414Halobacteroides halobius DSM 5150, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain6e-1166.2
NC_015416:2113949:213483821348382135245408Methanosaeta concilii GP-6 chromosome, complete genomeCopG family transcriptional regulator3e-1064.3
NC_015680:369777:385309385309385725417Pyrococcus yayanosii CH1 chromosome, complete genometranscription nickel responsive regulator (nikR)1e-0961.6
NC_003552:2133590:215101021510102151447438Methanosarcina acetivorans C2A, complete genometranscriptional regulator, CopG family7e-0959.3
NC_019942:987134:103530410353041035708405Aciduliprofundum sp. MAR08-339, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain1e-0858.9
NC_013156:728397:748013748013748438426Methanocaldococcus fervens AG86, complete genometranscriptional regulator NikR, CopG family2e-0858.2
NC_000909:467607:485578485578486003426Methanocaldococcus jannaschii DSM 2661, complete genomenickel responsive regulator2e-0857.8
NC_000868:1386592:139771213977121398128417Pyrococcus abyssi GE5, complete genomenickel responsive regulator3e-0857.4
NC_007355:2838952:285914428591442859569426Methanosarcina barkeri str. fusaro chromosome 1, complete sequencetranscriptional regulator, CopG family9e-0855.8
NC_019940:3089884:310346431034643103886423Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator2e-0754.7
NC_004917:340997:341634341634342065432Helicobacter hepaticus ATCC 51449, complete genomenickel responsive regulator7e-0752.8
NC_013959:83992:101591101591102100510Sideroxydans lithotrophicus ES-1 chromosome, complete genometranscriptional regulator NikR, CopG family5e-0650.1