Pre_GI: BLASTP Hits

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Query: NC_012917:985617:1000254 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1000254, End: 1000970, Length: 717

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:3316877:332780833278083328524717Edwardsiella ictaluri 93-146, complete genomehypothetical protein9e-123439
NC_011283:5011497:501393050139305014646717Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-122439
NC_013508:3188978:323937932393793240095717Edwardsiella tarda EIB202, complete genomehypothetical protein2e-122437
NC_011601:1114104:115026811502681150984717Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein2e-117421
NC_009665:2602000:262300026230002623743744Shewanella baltica OS185 chromosome, complete genomehypothetical protein3e-75281
NC_015581:680460:683559683559684281723Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomehypothetical protein9e-71266
NC_014216:2334568:235084623508462351619774Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeprotein of unknown function DUF459e-58223
NC_014814:3892000:390388139038813904606726Mycobacterium sp. Spyr1 chromosome, complete genomemetal-dependent hydrolase4e-54211
NC_021184:207492:211795211795212508714Desulfotomaculum gibsoniae DSM 7213, complete genomeputative metal-dependent hydrolase5e-54211
NC_014934:3786132:379476837947683795481714Cellulophaga algicola DSM 14237 chromosome, complete genomehypothetical protein1e-53209
NC_010581:2999002:304575830457583046489732Beijerinckia indica subsp. indica ATCC 9039, complete genomeprotein of unknown function DUF457e-53207
NC_014550:2562053:258681325868132587532720Arthrobacter arilaitensis Re117, complete genomehypothetical protein8e-51200
NC_017187:814940:832640832640833353714Arcobacter butzleri ED-1, complete genomehypothetical protein1e-50199
NC_013929:3299736:333195433319543332676723Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-50198
NC_013235:5127148:513992951399295140657729Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF456e-50197
NC_007164:1434305:146910814691081469854747Corynebacterium jeikeium K411, complete genomehypothetical protein8e-50196
NC_015635:4864349:487639248763924877132741Microlunatus phosphovorus NM-1, complete genomehypothetical protein5e-48191
NC_011206:863987:868140868140868874735Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF451e-47189
NC_011761:684969:689122689122689856735Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein1e-47189
NC_019977:1353332:136725713672571367973717Methanomethylovorans hollandica DSM 15978, complete genomeputative metal-dependent hydrolase2e-46185
NC_015942:2213710:223315222331522233892741Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein5e-46184
NC_016590:1380092:139055813905581391286729Burkholderia sp. YI23 chromosome 3, complete sequencezinc metalloprotease1e-45182
NC_010994:859500:878308878308879012705Rhizobium etli CIAT 652, complete genomehypothetical protein7e-45180
NC_008611:3579500:358971435897143590352639Mycobacterium ulcerans Agy99, complete genomezinc metalloprotease8e-45180
NC_012440:1215838:122285112228511223561711Persephonella marina EX-H1, complete genomezinc metalloprotease9e-43173
NC_003901:2727361:273144327314432732159717Methanosarcina mazei Go1, complete genomeZinc metalloprotease1e-42172
NC_011901:1860887:188593218859321886648717Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completezinc metalloprotease7e-42170
NC_013720:1382561:140264214026421403358717Pirellula staleyi DSM 6068, complete genomeprotein of unknown function DUF456e-42170
NC_009943:272158:273252273252274013762Candidatus Desulfococcus oleovorans Hxd3, complete genomeprotein of unknown function DUF451e-41169
NC_021064:793098:808571808571809317747Propionibacterium avidum 44067, complete genomehypothetical protein1e-39162
NC_009633:4097536:413918741391874139939753Alkaliphilus metalliredigens QYMF chromosome, complete genomehypothetical protein9e-39160
NC_019902:1863162:186452418645241865234711Thioalkalivibrio nitratireducens DSM 14787, complete genomeputative metal-dependent hydrolase1e-37156
NC_017271:1289278:130217413021741302878705Xanthomonas campestris pv. raphani 756C chromosome, completezinc metalloprotease1e-37156
NC_012778:1573847:1583235158323515857902556Eubacterium eligens ATCC 27750, complete genomehypothetical protein3e-37155
NC_013895:1332832:133759613375961338426831Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completehypothetical protein2e-37155
NC_007575:973559:991742991742992401660Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein3e-2099
NC_010694:436500:445797445797446207411Erwinia tasmaniensis, complete genomehypothetical protein2e-1789.7
NC_008601:753221:756324756324756983660Francisella tularensis subsp. novicida U112, complete genomepredicted metal-dependent hydrolase9e-1787
NC_016023:267581:284280284280285002723Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein3e-1685.5
NC_018720:47984:669716697167579609Bifidobacterium asteroides PRL2011 chromosome, complete genomeputative metal-dependent hydrolase8e-1684
NC_018604:2579000:261007926100792610777699Brachyspira pilosicoli WesB complete genomeputative metal-dependent hydrolase2e-1582.4
NC_016023:1923170:193655119365511937273723Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein1e-1480.1
NC_015161:1556766:158660715866071587332726Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein3e-1479
NC_006270:4149004:416263541626354163360726Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-1478.6
NC_006322:4149500:416275041627504163475726Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-1478.6
NC_021184:3259908:327702332770233277727705Desulfotomaculum gibsoniae DSM 7213, complete genomeputative metal-dependent hydrolase5e-1478.2
NC_008618:10915:135281352814124597Bifidobacterium adolescentis ATCC 15703, complete genomepredicted metal-dependent hydrolase6e-1477.8
NC_003902:3430051:345001834500183450764747Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein1e-1376.6
NC_007086:1457531:146002814600281460774747Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein1e-1376.6
NC_010688:1435694:143817014381701438916747Xanthomonas campestris pv. campestris, complete genomehypothetical protein6e-1374.3
NC_002937:1764117:177699817769981777741744Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein6e-1374.3
NC_013592:446092:460082460082460804723Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF458e-1373.9
NC_016803:2431672:244331024433102444038729Desulfovibrio desulfuricans ND132 chromosome, complete genomehypothetical protein3e-1272.4
NC_016642:757964:761247761247761987741Pseudovibrio sp. FO-BEG1 chromosome, complete genomehypothetical protein3e-1272
NC_014414:1104386:111338811133881114113726Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein3e-1272
NC_016620:781995:800209800209800919711Bacteriovorax marinus SJ, complete genomehypothetical protein4e-1271.6
NC_009524:1369395:136863413686341369398765Psychrobacter sp. PRwf-1 chromosome, complete genomehypothetical protein4e-1271.6
NC_009922:2323083:233260823326082333318711Alkaliphilus oremlandii OhILAs, complete genomeprotein of unknown function DUF458e-1270.5
NC_006672:47610:623616236163098738Gluconobacter oxydans 621H plasmid pGOX1, complete sequencehypothetical protein5e-1168.2
NC_018876:2151226:215688321568832157608726Methanolobus psychrophilus R15 chromosome, complete genomeprotein of unknown function DUF452e-1065.9
NC_014217:2760898:276659827665982767314717Starkeya novella DSM 506 chromosome, complete genomeprotein of unknown function DUF454e-0962
NC_012108:2194251:219857721985772199272696Desulfobacterium autotrophicum HRM2, complete genomemetal-dependent hydrolase family protein3e-0962
NC_008313:1:140531405314766714Ralstonia eutropha H16 chromosome 1, complete sequencepredicted metal-dependent hydrolase3e-0858.9
NC_016047:2480921:248716224871622487836675Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completezinc metalloprotease3e-0755.5
NC_015389:809474:813443813443814165723Coriobacterium glomerans PW2 chromosome, complete genomeprotein of unknown function DUF454e-0755.1
NC_012881:1802000:181666418166641817356693Desulfovibrio salexigens DSM 2638, complete genomeprotein of unknown function DUF454e-0755.1
NC_014314:1485500:151318815131881513871684Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein1e-0653.5
NC_009439:608500:620768620768621475708Pseudomonas mendocina ymp, complete genomehypothetical protein6e-0651.2