Pre_GI: BLASTP Hits

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Query: NC_012917:2971702:2981623 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2981623, End: 2981973, Length: 351

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:2004088:201459920145992014949351Pectobacterium wasabiae WPP163, complete genomeflagellar transcriptional activator7e-55211
NC_012880:1765920:179172917917291792079351Dickeya dadantii Ech703, complete genomeflagellar transcriptional activator4e-54209
NC_004547:1873390:193436119343611934720360Erwinia carotovora subsp. atroseptica SCRI1043, complete genometranscriptional activator FlhD5e-54209
NC_013592:1668092:169563416956341695984351Dickeya dadantii Ech586, complete genomeflagellar transcriptional activator2e-52204
NC_014500:3071764:308981930898193090169351Dickeya dadantii 3937 chromosome, complete genomeflagellar transcriptional activator flhD3e-52203
NC_015566:3269469:327110132711013271451351Serratia sp. AS12 chromosome, complete genometranscriptional activator FlhD9e-45178
NC_015061:1902251:193306819330681933412345Rahnella sp. Y9602 chromosome, complete genomeflagellar transcriptional activator4e-43172
NC_017265:1715035:172883017288301729096267Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,1e-34144
NC_010159:2955562:296359729635972963854258Yersinia pestis Angola, complete genome1e-34144
NC_009381:2009842:201728020172802017537258Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-34144
NC_010694:1052722:106264810626481062998351Erwinia tasmaniensis, complete genomeFlagellar transcriptional activator8e-22102
NC_004344:26828:379813798138325345Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,transcriptional activator FlhD1e-21101
NC_007973:1821753:183124818312481831565318Ralstonia metallidurans CH34 chromosome 1, complete sequenceflagellar transcriptional activator9e-1889
NC_010682:1593108:160674116067411607085345Ralstonia pickettii 12J chromosome 1, complete sequenceflagellar transcriptional activator7e-0752.8