Pre_GI: BLASTP Hits

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Query: NC_012560:1322000:1343293 Azotobacter vinelandii DJ, complete genome

Start: 1343293, End: 1343985, Length: 693

Host Lineage: Azotobacter vinelandii; Azotobacter; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism was first isolated from the soil in Vineland, New Jersey, although it is found worldwide. It is a large obligate aerobe that has one of the highest respiratory rates of any organism. Azotobacter vinelandii also produces a number of unusual nitrogenases which allow it to fix atmospheric nitrogen to ammonia, a compound it can then use as a nitrogen source. It protects the oxygen-sensitive nitrogenase enzymes through its high respiratory rate, which sequesters the nitrogenase complexes in an anoxic environment. This organism has a number of unusual characteristics. Under extreme environmental conditions, the cell will produce a cyst that is resistant to dessication and is surrounded by two capsular polysaccharide layers. This organism produces two industrially important polysaccharides, poly-beta-hydroxybutyrate (PHB) and alginate. PHB is a thermoplastic biopolymer, and alginate is used in the food industry. Alginate is also used by the pathogen Pseudomonas aeruginosa to infect the lungs of cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:1322000:134330513433051343997693Azotobacter vinelandii CA6, complete genomeDNA repair protein RecO2e-125448
NC_013941:3182576:320467332046733205401729Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA repair protein recO6e-31134
NC_003197:2720726:272318527231852723913729Salmonella typhimurium LT2, complete genomeDNA repair protein RecO4e-31134
NC_011080:2722492:272323527232352723963729Salmonella enterica subsp. enterica serovar Newport str. SL254,DNA repair protein RecO4e-31134
NC_016810:2719779:272090227209022721630729Salmonella enterica subsp. enterica serovar Typhimurium strDNA repair protein RecO4e-31134
NC_016856:2773995:277473827747382775466729Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA repair protein RecO4e-31134
NC_016857:2719779:272090227209022721630729Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA repair protein RecO4e-31134
NC_016860:2716152:271861127186112719339729Salmonella enterica subsp. enterica serovar Typhimurium strDNA repair protein RecO4e-31134
NC_016863:2721826:272294927229492723677729Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA repair protein RecO4e-31134
NC_017046:2717810:272026927202692720997729Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA repair protein RecO4e-31134
NC_012880:3241886:325235532523553253089735Dickeya dadantii Ech703, complete genomeDNA repair protein RecO4e-29128
NC_012912:1229333:123389312338931234627735Dickeya zeae Ech1591, complete genomeDNA repair protein RecO7e-29127
NC_007298:2170181:218293921829392183667729Dechloromonas aromatica RCB, complete genomeDNA repair protein RecO2e-27122