Pre_GI: BLASTP Hits

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Query: NC_011961:891815:894673 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 894673, End: 895593, Length: 921

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021182:1188000:119757811975781198474897Clostridium pasteurianum BC1, complete genomeDMT(drug/metabolite transporter) superfamily permease1e-1584.3
NC_016751:469289:469289469289470164876Marinitoga piezophila KA3 chromosome, complete genomeDMT(drug/metabolite transporter) superfamily permease3e-1582.4
NC_012785:205502:209515209515210432918Kosmotoga olearia TBF 19.5.1, complete genomeprotein of unknown function DUF6 transmembrane2e-1273.2
NC_011772:3259483:327686232768623277746885Bacillus cereus G9842, complete genometransporter, EamA family1e-1170.9
NC_012581:1075663:109223910922391093123885Bacillus anthracis str. CDC 684 chromosome, complete genometransporter, EamA family2e-1169.7
NC_003909:927955:941809941809942720912Bacillus cereus ATCC 10987, complete genometransporter, EamA family3e-1169.7
NC_021184:4129419:413450441345044135442939Desulfotomaculum gibsoniae DSM 7213, complete genomehypothetical protein1e-0963.9
NC_007103:230872:261405261405262283879Bacillus cereus E33L plasmid pE33L466, complete sequencepossible drug/metabolite exporter2e-0963.5
NC_012489:4336790:435356943535694354507939Gemmatimonas aurantiaca T-27, complete genomehypothetical membrane protein8e-0961.2
NC_009078:510525:512941512941513840900Burkholderia pseudomallei 1106a chromosome II, complete sequencehypothetical protein1e-0860.5
NC_006270:204000:226599226599227507909Bacillus licheniformis ATCC 14580, complete genomeconserved hypothetical membrane protein YbfH2e-0860.1
NC_006322:203932:226413226413227321909Bacillus licheniformis ATCC 14580, complete genomeYbfH2e-0860.1
NC_010644:254725:269478269478270395918Elusimicrobium minutum Pei191, complete genomehypothetical protein8e-0858.2
NC_015660:1869962:188670818867081887652945Geobacillus thermoglucosidasius C56-YS93 chromosome, completehypothetical protein1e-0757.4
NC_014650:1862165:186939718693971870341945Geobacillus sp. Y4.1MC1 chromosome, complete genomehypothetical protein1e-0757.4
NC_009256:2509806:253380925338092534711903Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein2e-0756.6
NC_017200:4240500:424216142421614243090930Bacillus thuringiensis serovar finitimus YBT-020 chromosome,integral membrane protein7e-0755.1
NC_008390:2448379:246543324654332466341909Burkholderia cepacia AMMD chromosome 1, complete sequenceprotein of unknown function DUF6, transmembrane9e-0754.7
NC_015931:1537960:157639915763991577334936Pyrolobus fumarii 1A, complete genomehypothetical protein1e-0653.9
NC_019896:3491000:349789834978983498782885Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeMembrane protein YdzE1e-0653.9
NC_015737:449914:466532466532467479948Clostridium sp. SY8519, complete genomedrug/metabolite transporter superfamily permease1e-0653.9
NC_016582:9551123:955448995544899555469981Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein3e-0653.1
NC_014931:4234288:426262042626204263543924Variovorax paradoxus EPS chromosome, complete genomeprotein of unknown function DUF6 transmembrane2e-0653.1
NC_014377:321949:324647324647325600954Thermosediminibacter oceani DSM 16646 chromosome, complete genomeprotein of unknown function DUF6 transmembrane5e-0652
NC_014976:2735423:274990927499092750793885Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein6e-0651.6
NC_015152:1230995:124803412480341248969936Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein8e-0651.2
NC_014171:261952:309552309552310472921Bacillus thuringiensis BMB171 chromosome, complete genomedrug/metabolite exporter family protein9e-0651.2
NC_007503:2010858:201156320115632012489927Carboxydothermus hydrogenoformans Z-2901, complete genomehypothetical protein9e-0651.2