Pre_GI: BLASTP Hits

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Query: NC_010102:4477836:4500506 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 4500506, End: 4501228, Length: 723

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4397074:441783844178384418617780Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-55216
NC_016832:4368948:438971543897154390491777Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-55216
NC_012125:4481808:450497845049784505754777Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-55216
NC_009832:358291:363199363199363942744Serratia proteamaculans 568, complete genomeDomain of unknown function DUF18453e-55215
NC_004631:4381724:440248844024884403267780Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-55214
NC_015567:313035:317964317964318707744Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element protein8e-55213
NC_015566:316340:317799317799318542744Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein8e-55213
NC_014029:331919:352680352680353423744Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-54212
NC_012779:305969:328945328945329700756Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-54211
NC_014228:3505320:351882535188253519550726Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-53209
NC_013892:1503162:150515815051581505883726Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-53208
NC_013892:3278647:329139432913943292119726Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-53208
NC_014228:3391500:341407334140733414798726Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein7e-52203
NC_016845:4539381:454590845459084546630723Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-51202
NC_004547:590844:598803598803599600798Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-48192
NC_010554:2872000:287701328770132877717705Proteus mirabilis HI4320, complete genomehypothetical protein2e-40166
NC_008463:5246954:526502252650225265750729Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-30132
NC_018080:5091772:511150951115095112237729Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein5e-30130
NC_009656:4527457:459115145911514592020870Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein5e-30130
NC_012660:2143376:214654721465472147302756Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein1e-29130
NC_016830:3869572:393560039356003936355756Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein1e-29130
NC_004129:5373886:539032153903215391052732Pseudomonas fluorescens Pf-5, complete genomehypothetical protein2e-28125
NC_012691:2614603:262793826279382628726789Tolumonas auensis DSM 9187, complete genomeDomain of unknown function DUF18453e-28125
NC_015379:2417312:245907724590772459862786Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein4e-28124
NC_013716:3512950:354671335467133547411699Citrobacter rodentium ICC168, complete genomehypothetical protein1e-27122
NC_008344:49039:116022116022116822801Nitrosomonas eutropha C91, complete genomehypothetical protein6e-27120
NC_009138:1974935:198907719890771989856780Herminiimonas arsenicoxydans, complete genomehypothetical protein1e-26120
NC_010170:1498253:150039215003921501171780Bordetella petrii, complete genomehypothetical protein2e-26119
NC_010170:1324758:135757413575741358395822Bordetella petrii, complete genomehypothetical protein2e-26119
NC_010170:1103224:110243311024331103227795Bordetella petrii, complete genomeputative transposon2e-26119
NC_009512:3282500:330707933070793307834756Pseudomonas putida F1, complete genomeDomain of unknown function DUF18453e-26119
NC_007086:2477040:248037624803762481131756Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein4e-26118
NC_010688:2781624:280464828046482805403756Xanthomonas campestris pv. campestris, complete genomehypothetical protein4e-26118
NC_008752:585884:608648608648609481834Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein4e-26118
NC_007005:1705406:171397217139721714751780Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein1e-25116
NC_015733:2658337:265833726583372659092756Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-25115
NC_013421:1780722:179981717998171800635819Pectobacterium wasabiae WPP163, complete genomeDomain of unknown function DUF18454e-25114
NC_002488:1638946:169790816979081698657750Xylella fastidiosa 9a5c, complete genomehypothetical protein7e-24110
NC_010519:1963256:198759619875961988354759Haemophilus somnus 2336 chromosome, complete genomehypothetical protein9e-22103
NC_020181:3328844:334125733412573341826570Enterobacter aerogenes EA1509E, complete genomeFIG141694: hypothetical protein in PFGI-1-like cluster2e-21102
NC_008739:41793:454214542146230810Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencehypothetical protein3e-21102
NC_012913:1041969:104714210471421047909768Aggregatibacter aphrophilus NJ8700, complete genomehypothetical protein2e-1892.4
NC_014532:3555550:356008735600873560911825Halomonas elongata DSM 2581, complete genomehypothetical protein1e-1480.5
NC_012731:600518:623751623751624362612Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-0859.3
NC_007484:667879:669914669914670657744Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein7e-0857.8
NC_011035:829945:8414638414638425661104Neisseria gonorrhoeae NCCP11945 chromosome, complete genomehypothetical protein1e-0756.6