Pre_GI: BLASTP Hits

Some Help

Query: NC_009800:289000:302940 Escherichia coli HS, complete genome

Start: 302940, End: 303839, Length: 900

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:2645438:265048526504852651384900Escherichia coli O111:H- str. 11128, complete genomeputative replication protein2e-167588
NC_011147:2496808:251062225106222511521900Salmonella enterica subsp. enterica serovar Paratyphi A strDNA replication2e-104379
NC_006511:2501500:251508625150862515985900Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCDNA replication2e-104379
NC_010067:2529750:258565725856572586556900Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-104377
NC_017328:303987:319215319215320105891Shigella flexneri 2002017 chromosome, complete genomeO protein9e-96350
NC_008258:269806:290308290308291132825Shigella flexneri 5 str. 8401, complete genomereplication protein O2e-93342
NC_016845:1285435:129611212961121296963852Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein9e-79293
NC_021066:2226826:224259322425932243426834Raoultella ornithinolytica B6, complete genomehypothetical protein2e-74279
NC_009778:2993218:301459530145953015491897Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-67256
NC_013850:1887556:190154319015431902436894Klebsiella variicola At-22 chromosome, complete genomereplication protein O3e-60231
NC_014306:3524980:356534435653443566291948Erwinia billingiae Eb661, complete genomePhage replication protein O2e-38159
NC_015566:3659318:3659318365931836604151098Serratia sp. AS12 chromosome, complete genomephage O protein family5e-1685.1
NC_009641:2101579:211896021189602119844885Staphylococcus aureus subsp. aureus str. Newman chromosome,phage regulatory protein4e-0755.8