Pre_GI: BLASTP Hits

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Query: NC_009800:1657550:1677482 Escherichia coli HS, complete genome

Start: 1677482, End: 1677808, Length: 327

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:2836000:291661729166172916943327Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-46184
NC_013850:2846069:287898528789852879311327Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function UPF00602e-46184
NC_008782:1510000:153120015312001531535336Acidovorax sp. JS42, complete genomeprotein of unknown function UPF00604e-30129
NC_015731:990000:997173997173997517345Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein2e-29127
NC_007947:485828:503294503294503620327Methylobacillus flagellatus KT, complete genomeprotein of unknown function UPF00608e-29125
NC_017506:1507943:150907415090741509406333Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein3e-27120
NC_009438:236424:252041252041252394354Shewanella putrefaciens CN-32 chromosome, complete genomehypothetical protein5e-26116
NC_016614:1178000:117938411793841179716333Vibrio sp. EJY3 chromosome 2, complete sequencehypothetical protein5e-2199.8
NC_010084:2484000:248412524841252484460336Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein7e-2095.9
NC_010804:996837:104031310403131040648336Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein7e-2095.9
NC_014910:2779573:278695927869592787291333Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein8e-2095.5
NC_014623:4535544:456529245652924565624333Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein6e-1682.8
NC_021182:1245692:126336912633691263704336Clostridium pasteurianum BC1, complete genomehypothetical protein4e-1373.2
NC_014507:2034000:204359620435962043922327Methanoplanus petrolearius DSM 11571 chromosome, complete genomehypothetical protein6e-1372.8
NC_019897:3669888:369183436918343692160327Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein1e-1272
NC_013960:1693643:170977417097741710097324Nitrosococcus halophilus Nc4 chromosome, complete genomeprotein of unknown function UPF00602e-1271.2
NC_007626:3522265:353276335327633533089327Magnetospirillum magneticum AMB-1, complete genomehypothetical protein3e-1270.5
NC_010602:2244729:233287723328772333224348Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'hypothetical protein3e-1167.4
NC_010842:2310756:233826423382642338611348Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomehypothetical protein3e-1167.4
NC_014507:2034000:204321620432162043599384Methanoplanus petrolearius DSM 11571 chromosome, complete genomehypothetical protein8e-1165.9
NC_007907:5185510:525793552579355258261327Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1065.5
NC_017347:2437902:245943724594372459763327Staphylococcus aureus subsp. aureus T0131 chromosome, completehypothetical protein2e-1064.7
NC_016943:4799915:481517548151754815510336Blastococcus saxobsidens DD2, complete genomehypothetical protein8e-0958.9
NC_015957:527777:530487530487530843357Streptomyces violaceusniger Tu 4113 chromosome, complete genomemembrane protein ynfA2e-0858.2
UCMB5137:409500:434408434408434734327Bacillus atrophaeus UCMB-5137hypothetical protein1e-0755.5
NC_014666:4547873:455633345563334556665333Frankia sp. EuI1c chromosome, complete genomeprotein of unknown function UPF00601e-0755.1
NC_014815:5888934:589313458931345893469336Micromonospora sp. L5 chromosome, complete genomehypothetical protein6e-0752.8