Pre_GI: BLASTP Hits

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Query: NC_009708:915814:923029 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 923029, End: 923625, Length: 597

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:5272863:528213052821305282723594Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-74279
AP010958:5272863:528213052821305282723594Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-74279
NC_008253:3161311:316278631627863163388603Escherichia coli 536, complete genomehypothetical protein3e-60231
NC_004431:279868:281863281863282471609Escherichia coli CFT073, complete genomehypothetical protein5e-60230
NC_013941:3676146:370804437080443708646603Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein6e-60229
NC_013592:446092:462187462187462762576Dickeya dadantii Ech586, complete genomehypothetical protein1e-48192
NC_013961:441719:463240463240463590351Erwinia amylovora, complete genomehypothetical protein2e-43174
NC_014618:4114004:413407641340764134648573Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein3e-38157
NC_004431:3409389:348706634870663487665600Escherichia coli CFT073, complete genomehypothetical protein1e-26119
NC_011751:3453683:351015535101553510754600Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-26119
NC_017328:3088907:312270431227043123276573Shigella flexneri 2002017 chromosome, complete genomehypothetical protein2e-26118
NC_004337:3049118:308300030830003083572573Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-26118
NC_004741:3041294:307383030738303074402573Shigella flexneri 2a str. 2457T, complete genomehypothetical protein2e-26118
NC_013716:5201097:523105052310505231649600Citrobacter rodentium ICC168, complete genomehypothetical protein2e-25115
NC_013421:1505176:150959415095941510127534Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-1995.1
NC_014618:4114004:413477241347724135305534Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein3e-1374.7