Pre_GI: BLASTP Hits

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Query: NC_009456:557962:560120 Vibrio cholerae O395 chromosome 1, complete sequence

Start: 560120, End: 560281, Length: 162

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:839318:859453859453859614162Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein2e-23107
NC_012583:683887:703661703661703822162Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-23107
NC_016628:193000:200564200564200722159Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein2e-1374.7
NC_014966:919442:929918929918930073156Vibrio vulnificus MO6-24/O chromosome II, complete sequencehypothetical protein8e-1372.4
NC_005140:883857:899595899595899750156Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein9e-1372.4
NC_013457:140474:147775147775147936162Vibrio sp. Ex25 chromosome 2, complete genomehypothetical protein8e-1268.9