Pre_GI: BLASTP Hits

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Query: NC_009439:1075170:1092581 Pseudomonas mendocina ymp, complete genome

Start: 1092581, End: 1092823, Length: 243

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:1144272:116063811606381160874237Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein4e-32136
NC_015556:4118304:412056141205614120806246Pseudomonas fulva 12-X chromosome, complete genomehypothetical protein3e-25113
NC_008463:5364428:536557153655715365855285Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein4e-22103
NC_018080:5192264:519455451945545194799246Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein7e-22102
NC_017223:51180:750287502875279252Bordetella pertussis CS chromosome, complete genomehypothetical protein1e-0858.9
NC_002929:52500:750287502875279252Bordetella pertussis Tohama I, complete genomehypothetical protein1e-0858.9
NC_002928:507749:533150533150533401252Bordetella parapertussis 12822, complete genomehypothetical protein2e-0858.2
NC_011901:2739984:275901027590102759249240Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein2e-0857.4
NC_013959:2666321:267971726797172679935219Sideroxydans lithotrophicus ES-1 chromosome, complete genomehypothetical protein8e-0855.8
NC_010645:406794:451031451031451270240Bordetella avium 197N, complete genomeexported protein1e-0652
NC_007347:3204637:323155932315593231813255Ralstonia eutropha JMP134 chromosome 1, complete sequencehypothetical protein2e-0651.2
NC_002927:506183:534503534503534754252Bordetella bronchiseptica RB50, complete genomehypothetical protein3e-0650.4