Pre_GI: BLASTP Hits

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Query: NC_008781:3365468:3397174 Polaromonas naphthalenivorans CJ2, complete genome

Start: 3397174, End: 3397728, Length: 555

Host Lineage: Polaromonas naphthalenivorans; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Naphthalene-degrading bacterium. Polaromonas naphthalenivorans was isolated from naphthalene-contaminated, freshwater sediment. This organism is capable of aerobic degradation of naphthalene at temperatures of less than 20 degrees C. Naphthalene is a polycyclic aromatic hydrocarbon (PAH). PAHs can be toxic and/or carcinogenic, therefore PAH contamination is of considerable concern.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012559:2663747:270735427073542707872519Laribacter hongkongensis HLHK9, complete genomeRfaH2e-21102
NC_008700:2701500:273069327306932731196504Shewanella amazonensis SB2B, complete genometranscriptional activator rfaH, putative1e-1479.7
NC_016609:8271000:827128182712818271790510Niastella koreensis GR20-10 chromosome, complete genomeNusG antitermination factor2e-1478.2
NC_008577:1579950:158776915877691588269501Shewanella sp. ANA-3 chromosome 1, complete sequenceNusG antitermination factor6e-1477
NC_009665:3460906:348608834860883486594507Shewanella baltica OS185 chromosome, complete genometranscriptional acivator RfaH6e-1477
NC_011663:1709003:171310317131031713609507Shewanella baltica OS223 chromosome, complete genometranscriptional acivator RfaH6e-1477
NC_009052:3381943:340800234080023408508507Shewanella baltica OS155, complete genomeNusG antitermination factor6e-1477
NC_019902:27574:458834588346371489Thioalkalivibrio nitratireducens DSM 14787, complete genomeTranscriptional activator RfaH2e-1375.5
NC_008322:1595500:159756415975641598064501Shewanella sp. MR-7, complete genomeNusG antitermination factor8e-1373.2
NC_009092:1599526:160845316084531608980528Shewanella loihica PV-4, complete genomeNusG antitermination factor4e-1271.2
NC_016026:997225:100262410026241003127504Micavibrio aeruginosavorus ARL-13 chromosome, complete genometranscription termination factor nusG family protein9e-1270.1
NC_011566:1597751:159965015996501600174525Shewanella piezotolerans WP3, complete genomeTranscriptional activator RfaH2e-1168.6
NC_004129:5846415:585309858530985853817720Pseudomonas fluorescens Pf-5, complete genometranscriptional activator RfaH2e-1168.6
NC_019904:5241444:527977352797735280276504Echinicola vietnamensis DSM 17526 chromosome, complete genometranscription antiterminator5e-1167.4
NC_007954:3171081:320585032058503206350501Shewanella denitrificans OS217, complete genometranscriptional activator RfaH1e-0962.8
NC_014532:1481787:148850814885081489050543Halomonas elongata DSM 2581, complete genomeK05785 transcriptional antiterminator RfaH2e-0962
NC_021150:1564229:156707215670721567533462Azotobacter vinelandii CA6, complete genometranscriptional activator RfaH1e-0859.3
NC_012560:1564500:156705915670591567520462Azotobacter vinelandii DJ, complete genometranscriptional activator RfaH1e-0859.3
NC_008262:2598920:263435626343562634877522Clostridium perfringens SM101, complete genometranscription termination/antitermination factor NusG1e-0859.3
NC_010424:1778459:179698617969861797507522Candidatus Desulforudis audaxviator MP104C, complete genomeNusG antitermination factor3e-0858.2
NC_014541:1165991:117021011702101170701492Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional acivator RfaH6e-0857
NC_014032:825793:926006926006926695690Salinibacter ruber M8 chromosome, complete genometranscription antitermination protein nusG2e-0755.1
NC_007677:771168:829009829009829698690Salinibacter ruber DSM 13855, complete genomeputative transcriptional regulator2e-0755.1
NC_017506:2504746:253812125381212538501381Marinobacter adhaerens HP15 chromosome, complete genometranscriptional activator RfaH5e-0753.9
NC_014041:558000:563449563449563943495Zunongwangia profunda SM-A87 chromosome, complete genomeNusG antitermination factor8e-0753.1
NC_009012:3204696:320775432077543208287534Clostridium thermocellum ATCC 27405, complete genomeNusG antitermination factor9e-0753.1
NC_018691:1822731:182592618259261826393468Alcanivorax dieselolei B5 chromosome, complete genometranscriptional activator RfaH1e-0652.8