Pre_GI: BLASTP Hits

Some Help

Query: NC_008435:2368000:2394634 Rhodopseudomonas palustris BisA53, complete genome

Start: 2394634, End: 2396355, Length: 1722

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010622:249625:2709012709012726401740Burkholderia phymatum STM815 chromosome 1, complete sequenceNERD domain protein4e-105382
NC_017068:1401352:1436468143646814381351668Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-44180
NC_016609:6750111:6766505676650567681961692Niastella koreensis GR20-10 chromosome, complete genomeNERD domain-containing protein5e-41169
NC_013526:567500:5709215709215726001680Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeNERD domain protein2e-38160
NC_015711:2050360:2064044206404420657621719Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein1e-35151
NC_015684:362236:3735403735403751471608Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein1e-34148
NC_011386:136223:1535621535621551691608Oligotropha carboxidovorans OM5, complete genomenuclease-related domain family1e-34148
NC_011770:2499432:2515459251545925171831725Pseudomonas aeruginosa LESB58, complete genomehypothetical protein4e-32139
NC_017078:247045:2618732618732636031731Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,hypothetical protein3e-30134
NC_020126:5558613:5570088557008855718271740Myxococcus stipitatus DSM 14675, complete genomehypothetical protein1e-29132
NC_008705:868623:9231419231419248321692Mycobacterium sp. KMS, complete genomeconserved hypothetical protein4e-26119
NC_008146:861319:9144129144129161031692Mycobacterium sp. MCS, complete genomehypothetical protein4e-26119
NC_008228:4915500:4924775492477549265951821Pseudoalteromonas atlantica T6c, complete genomeNERD domain-containing family protein2e-25117
NC_008781:2883968:289717628971762898150975Polaromonas naphthalenivorans CJ2, complete genomehypothetical protein2e-25117
NC_014151:3687612:3692966369296636946331668Cellulomonas flavigena DSM 20109 chromosome, complete genomeNERD domain protein4e-24113
NC_008260:1885969:1904538190453819064331896Alcanivorax borkumensis SK2, complete genomeHypotetical protein1e-22108
NC_017955:4075804:4085074408507440867141641Modestobacter marinus, complete genomenuclease7e-2099.4
NC_011901:1860887:1879189187918918810481860Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeDNA helicase II2e-1894
NC_011294:4604283:4615608461560846174491842Salmonella enterica subsp. enterica serovar Enteritidis strtype I restriction enzyme7e-1892.8
NC_011274:4577402:4588873458887345907141842Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type I restriction enzyme7e-1892.8
NC_016831:4556761:4568232456823245700731842Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative Type I restriction enzyme9e-1892.4
NC_014924:2399524:2419707241970724213531647Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeNERD domain protein9e-1892
NC_010995:764567:7645677645677664021836Cellvibrio japonicus Ueda107, complete genomeputative DNA helicase II2e-1791.7
NC_011958:1031592:103742410374241038389966Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein1e-1791.7
NC_011205:4761598:4772922477292247747631842Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DNA helicase II2e-1791.3
NC_019902:3397170:3401800340180034035691770Thioalkalivibrio nitratireducens DSM 14787, complete genomeDNA helicase II; NERD domain-containing protein2e-1687.8
NC_016906:181254:2298072298072314591653Gordonia polyisoprenivorans VH2 chromosome, complete genomenuclease-related domain-containing protein3e-1687.4
NC_011662:317831:3199873199873216091623Thauera sp. MZ1T, complete genomeNERD domain protein2e-1584.7
NC_012521:1:1788417884195781695Rhodococcus opacus B4 plasmid pROB02, complete sequencehypothetical protein7e-1582.8
NC_013716:5201097:5253209525320952550231815Citrobacter rodentium ICC168, complete genomeputative DNA helicase2e-1377.8
NC_014924:3334386:3341593334159333434701878Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeNERD domain protein3e-1377.4
CU928145:3360967:3398367339836734001541788Escherichia coli 55989 chromosome, complete genomeputative UvrD/REP helicase3e-1377
NC_011748:3360967:3398367339836734001541788Escherichia coli 55989, complete genomeputative UvrD/REP helicase3e-1377
NC_010002:4038500:4045257404525740470621806Delftia acidovorans SPH-1, complete genomeNERD domain protein2e-1274.3
NC_007511:1300978:1302594130259413042611668Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein6e-1272.8
NC_016002:2946702:2979398297939829810291632Pseudogulbenkiania sp. NH8B, complete genomeNERD domain containing protein1e-1171.6
NC_015726:3452232:3455641345564134574731833Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein2e-1171.6
NC_014666:8488567:8500332850033285020321701Frankia sp. EuI1c chromosome, complete genomeNERD domain protein2e-1171.2
NC_012803:1552122:1568191156819115704672277Micrococcus luteus NCTC 2665, complete genomeDNA/RNA helicase, superfamily I9e-0962.4
NC_016935:7872425:7878284787828478802091926Paenibacillus mucilaginosus 3016 chromosome, complete genomeNERD domain-containing protein1e-0862.4
NC_003296:140889:1483601483601501981839Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein1e-0861.6
NC_014391:1812500:1824628182462818261481521Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeNERD domain-containing protein2e-0861.2
NC_013457:1703201:1711753171175317136571905Vibrio sp. Ex25 chromosome 2, complete genomehypothetical protein3e-0860.8
NC_008261:421000:4293454293454318282484Clostridium perfringens ATCC 13124, complete genomehypothetical protein5e-0860.1
NC_015690:7785875:7806015780601578079401926Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNERD domain-containing protein2e-0758.2