Pre_GI: BLASTP Hits

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Query: NC_008228:3679949:3697689 Pseudoalteromonas atlantica T6c, complete genome

Start: 3697689, End: 3699005, Length: 1317

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017277:352263:3657163657163677852070Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-0860.8
NC_017052:352251:3657043657043677732070Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein2e-0860.8
NC_017039:352263:3657163657163677852070Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein2e-0860.8
NC_000911:352263:3657163657163677852070Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-0860.8
NC_008262:784878:8265578265578275611005Clostridium perfringens SM101, complete genomeglycosyl transferase, group 2 family protein domain protein5e-0859.7
NC_007413:2961611:2965749296574929687723024Anabaena variabilis ATCC 29413, complete genomeGlycosyl transferase, family 24e-0756.6
NC_003413:748906:761479761479762375897Pyrococcus furiosus DSM 3638, complete genomeglycosyl transferase5e-0756.2
NC_015216:808000:818498818498819394897Methanobacterium sp. AL-21 chromosome, complete genomefamily 2 glycosyl transferase7e-0755.5
NC_000961:372000:3910673910673920711005Pyrococcus horikoshii OT3, complete genomehypothetical protein1e-0655.1
NC_006576:1551939:1564531156453115656791149Synechococcus elongatus PCC 6301, complete genomehypothetical protein1e-0655.1
NC_007604:41495:5520455204563521149Synechococcus elongatus PCC 7942, complete genomehypothetical protein1e-0655.1
NC_008740:1815743:182511118251111826010900Marinobacter aquaeolei VT8, complete genomeglycosyl transferase, family 22e-0654.3
NC_009454:2663539:2686327268632726881231797Pelotomaculum thermopropionicum SI, complete genomeglycosyltransferase2e-0654.3
NC_016051:1429800:144151414415141442437924Thermococcus sp. AM4 chromosome, complete genomeglycosyltransferase2e-0653.9
NC_019904:3072241:308224330822433083091849Echinicola vietnamensis DSM 17526 chromosome, complete genomeglycosyl transferase family protein2e-0653.9
NC_009051:165102:1732981732981762882991Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, family 23e-0653.5
NC_015435:825853:835951835951836844894Metallosphaera cuprina Ar-4 chromosome, complete genomeglycosyl transferase family 23e-0653.5
NC_014758:1207894:121561212156121216520909Calditerrivibrio nitroreducens DSM 19672 chromosome, completeglycosyl transferase family 24e-0653.1
NC_003272:637970:6503286503286533693042Nostoc sp. PCC 7120, complete genomehypothetical protein8e-0652