Pre_GI: BLASTP Hits

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Query: NC_007953:572926:592082 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 592082, End: 592789, Length: 708

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006834:787500:814159814159814923765Xanthomonas oryzae pv. oryzae KACC10331, complete genomeIpsJ protein9e-82303
NC_014958:557208:581986581986582681696Deinococcus maricopensis DSM 21211 chromosome, complete genome3-oxoacid CoA-transferase subunit A4e-79294
NC_010338:4148667:416427441642744164984711Caulobacter sp. K31, complete genome3-oxoacid CoA-transferase, A subunit5e-77287
NC_021171:1689518:170194617019461702647702Bacillus sp. 1NLA3E, complete genomeScoA protein9e-76283
NC_020210:2044944:206309620630962063782687Geobacillus sp. GHH01, complete genomesuccinyl CoA:3-oxoacid CoA-transferase subunit A2e-75282
NC_010170:1219641:123109812310981231802705Bordetella petrii, complete genome3-oxoacid CoA-transferase subunit A2e-75282
NC_013939:1927424:1941123194112319424631341Deferribacter desulfuricans SSM1, complete genome3-oxoacid CoA-transferase3e-69261
NC_008700:1627401:164585916458591646560702Shewanella amazonensis SB2B, complete genome3-oxoacid CoA-transferase5e-69260
NC_015711:6522808:655661865566186557316699Myxococcus fulvus HW-1 chromosome, complete genome3-oxoacid CoA-transferase subunit A5e-69260
NC_008345:3287000:328701332870133287717705Shewanella frigidimarina NCIMB 400, complete genome3-oxoacid CoA-transferase, A subunit4e-68257
NC_016510:1958453:196506119650611965759699Flavobacterium columnare ATCC 49512 chromosome, complete genome3-oxoacid CoA-transferase subunit A2e-67255
NC_015673:525638:544425544425545120696Corynebacterium resistens DSM 45100 chromosome, complete genome3-oxoacid CoA-transferase subunit A8e-67253
NC_015514:3351052:335602533560253356804780Cellulomonas fimi ATCC 484 chromosome, complete genome3-oxoacid CoA-transferase subunit A2e-59229
NC_008061:2368517:239600223960022396718717Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence3-oxoacid CoA-transferase, subunit A2e-53209
NC_007511:3512100:353224135322413532954714Burkholderia sp. 383 chromosome 2, complete sequence3-oxoadipate CoA-transferase1e-52206
NC_011881:89705:109916109916110602687Arthrobacter chlorophenolicus A6 plasmid pACHL02, complete3-oxoacid CoA-transferase, A subunit1e-47189
NC_009512:5920960:593770859377085938403696Pseudomonas putida F1, complete genome3-oxoacid CoA-transferase, A subunit1e-47189
NC_014640:4951076:497677449767744977472699Achromobacter xylosoxidans A8 chromosome, complete genome3-oxoadipate CoA-transferase subunit A3e-46184
NC_010617:665830:669300669300669998699Kocuria rhizophila DC2201, complete genome3-oxoadipate CoA-transferase subunit A4e-45181
NC_012785:638000:645243645243645896654Kosmotoga olearia TBF 19.5.1, complete genome3-oxoacid CoA-transferase, A subunit2e-44179
NC_014931:5573942:559123755912375591938702Variovorax paradoxus EPS chromosome, complete genome3-oxoacid CoA-transferase, A subunit7e-44177
NC_009338:555587:554892554892555590699Mycobacterium gilvum PYR-GCK chromosome, complete genome3-oxoacid CoA-transferase subunit A2e-43176
NC_015160:3749636:376486137648613765508648Odoribacter splanchnicus DSM 20712 chromosome, complete genome3-oxoacid CoA-transferase, A subunit2e-43175
NC_017986:5833819:585424358542435854932690Pseudomonas putida ND6 chromosome, complete genome4-methyl-3-oxoadipate CoA-transferase alpha-subunit1e-42173
NC_012470:580373:602457602457603107651Streptococcus equi subsp. zooepidemicus, complete genomeacetate CoA-transferase alpha subunit1e-42173
NC_017192:88940:101184101184101831648Arcobacter sp. L, complete genomeputative 3-oxoacid CoA-transferase alpha subunit2e-42172
NC_008705:1839983:185921518592151859913699Mycobacterium sp. KMS, complete genome3-oxoacid CoA-transferase, A subunit1e-42172
NC_009077:1725683:177846817784681779166699Mycobacterium sp. JLS, complete genome3-oxoacid CoA-transferase, A subunit1e-42172
NC_008705:1839983:184580018458001846498699Mycobacterium sp. KMS, complete genome3-oxoacid CoA-transferase, A subunit1e-42172
NC_016604:3184855:322598532259853226680696Mycobacterium rhodesiae NBB3 chromosome, complete genome3-oxoacid CoA-transferase subunit A1e-42172
NC_004193:2692136:270154927015492702196648Oceanobacillus iheyensis HTE831, complete genomebutyrate-acetoacetate CoA-transferase small chain1e-42172
NC_003454:339345:346254346254346907654Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeAcetoacetate:butyrate/acetate coenzyme A transferase1e-41169
NC_020291:2487575:249548424954842496137654Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeacetate CoA-transferase subunit alpha6e-40164
NC_009454:259022:279244279244279894651Pelotomaculum thermopropionicum SI, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit4e-39161
NC_009718:203998:215519215519216172654Fervidobacterium nodosum Rt17-B1, complete genome3-oxoacid CoA-transferase, A subunit4e-39161
NC_011894:2359128:237837923783792379035657Methylobacterium nodulans ORS 2060, complete genome3-oxoacid CoA-transferase, A subunit4e-39161
NC_010718:2385400:238540023854002386056657Natranaerobius thermophilus JW/NM-WN-LF, complete genomebutyryl-CoA:acetoacetate CoA-transferase alpha subunit8e-38157
NC_020911:3076791:309830830983083099027720Octadecabacter antarcticus 307, complete genomefamily I CoA-transferase subunit A3e-37155
NC_014614:1259236:127530512753051275955651Clostridium sticklandii, complete genomeacetyl-CoA:acetoacetyl-CoA transferase, alpha subunit5e-37154
NC_016751:469289:474517474517475170654Marinitoga piezophila KA3 chromosome, complete genome3-oxoacid CoA-transferase subunit A5e-37154
NC_010003:1126800:115023311502331150889657Petrotoga mobilis SJ95, complete genome3-oxoacid CoA-transferase, A subunit2e-33142
NC_001264:28266:5812258122595161395Deinococcus radiodurans R1 chromosome 2, complete sequencesuccinyl-CoA:3-ketoacid-CoA transferase, putative2e-32139
NC_015425:2144639:217943621794362180152717Clostridium botulinum BKT015925 chromosome, complete genomeacetate CoA-transferase subunit alpha2e-31135
NC_008593:1917118:195441319544131955129717Clostridium novyi NT, complete genomeAcetate CoA-transferase alpha subunit7e-30130
NC_010170:1470755:148073714807371481072336Bordetella petrii, complete genome3-oxoacid CoA-transferase subunit A, fragment1e-20100
NC_009717:271385:295649295649296638990Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequencecoenzyme A transferase2e-0859.3
NC_011894:2747491:2756359275635927582991941Methylobacterium nodulans ORS 2060, complete genomecoenzyme A transferase5e-0858.2
NC_009454:1577319:1611070161107016126321563Pelotomaculum thermopropionicum SI, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase1e-0756.6
NC_015873:1241354:1260304126030412618541551Megasphaera elsdenii DSM 20460, complete genomecoenzyme A transferase1e-0653.5
NC_015737:2691246:2738530273853027401131584Clostridium sp. SY8519, complete genomehypothetical protein5e-0651.6
NC_009617:2355662:2370773237077323723291557Clostridium beijerinckii NCIMB 8052 chromosome, complete genomecoenzyme A transferase5e-0651.6
NC_007644:1293701:1301959130195913035421584Moorella thermoacetica ATCC 39073, complete genomeCoenzyme A transferase5e-0651.6