Pre_GI: BLASTP Hits

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Query: NC_007951:2045830:2045830 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2045830, End: 2046480, Length: 651

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010084:534937:538121538121538765645Burkholderia multivorans ATCC 17616 chromosome 1, completemaleylacetoacetate isomerase5e-49194
NC_008786:4216152:421896342189634219631669Verminephrobacter eiseniae EF01-2, complete genomemaleylacetoacetate isomerase3e-43174
NC_007951:1928906:193349419334941934138645Burkholderia xenovorans LB400 chromosome 1, complete sequenceMaleylacetoacetate isomerase (HmgC)1e-40166
NC_013446:3147202:317804531780453178689645Comamonas testosteroni CNB-2, complete genomemaleylacetoacetate isomerase1e-38159
NC_009524:861500:876371876371877015645Psychrobacter sp. PRwf-1 chromosome, complete genomemaleylacetoacetate isomerase2e-38159
NC_009524:861500:880815880815881462648Psychrobacter sp. PRwf-1 chromosome, complete genomemaleylacetoacetate isomerase2e-37155
NC_009379:1910891:192810419281041928796693Polynucleobacter sp. QLW-P1DMWA-1, complete genomemaleylacetoacetate isomerase3e-37154
NC_008781:2575213:259538625953862596024639Polaromonas naphthalenivorans CJ2, complete genomemaleylacetoacetate isomerase2e-36152
NC_007508:4283750:431293743129374313599663Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeMaleylacetoacetate isomerase2e-35148
NC_003919:4258788:428001342800134280675663Xanthomonas axonopodis pv. citri str. 306, complete genomemaleylacetoacetate isomerase6e-35147
NC_010688:4235528:426271942627194263381663Xanthomonas campestris pv. campestris, complete genomemaleylacetoacetate isomerase8e-35146
NC_010717:4626178:464860546486054649267663Xanthomonas oryzae pv. oryzae PXO99A, complete genomemaleylacetoacetate isomerase2e-34145
NC_010501:908000:911510911510912142633Pseudomonas putida W619, complete genomemaleylacetoacetate isomerase2e-32139
NC_015726:1813961:181948918194891820094606Cupriavidus necator N-1 chromosome 1, complete sequencemaleylacetoacetate isomerase MaiA2e-29129
NC_016026:296951:296307296307296954648Micavibrio aeruginosavorus ARL-13 chromosome, complete genomemaleylacetoacetate isomerase6e-29127
NC_020209:397376:402317402317402952636Pseudomonas poae RE*1-1-14, complete genomemaleylacetoacetate isomerase8e-28123
NC_007516:532500:535525535525536205681Synechococcus sp. CC9605, complete genomeputative maleylacetoacetate isomerase3e-1685.1
NC_010162:7571525:759098575909857591608624Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-0858.9
NC_015740:1017000:103609610360961036713618Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completestringent starvation protein A2e-0755.8
NC_006349:2311817:144701447015093624Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceglutathione S-transferase7e-0753.9
NC_007492:6372900:637723563772356377918684Pseudomonas fluorescens PfO-1, complete genomeGlutathione S-transferase-like2e-0652.8
NC_008463:4342119:436139443613944362023630Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable glutathione S-transferase2e-0652.8
NC_021150:4929670:493289049328904933519630Azotobacter vinelandii CA6, complete genomeGlutathione S-transferase3e-0652
NC_012560:4929683:493290349329034933532630Azotobacter vinelandii DJ, complete genomeGlutathione S-transferase3e-0652
NC_012560:1260031:127286612728661273483618Azotobacter vinelandii DJ, complete genomeStringent starvation protein A6e-0650.8
NC_021150:1258780:127287812728781273495618Azotobacter vinelandii CA6, complete genomeStringent starvation protein A6e-0650.8
NC_014840:205723:257140257140257757618Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceglutathione S-transferase domain-containing protein7e-0650.8
NC_011365:1865687:189016918901691890768600Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeglutathione S-transferase domain-containing protein1e-0550.4