Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1804109 Thermobifida fusca YX, complete genome

Start: 1804109, End: 1805200, Length: 1092

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014168:1724993:1757993175799317591381146Segniliparus rotundus DSM 44985 chromosome, complete genomeflavin-containing monooxygenase FMO2e-72272
NC_013929:2696648:2698697269869726997551059Streptomyces scabiei 87.22 chromosome, complete genomeNADH binding oxidoreductase3e-66252
NC_003888:7561923:7608214760821476092781065Streptomyces coelicolor A3(2), complete genomemonooxygenase7e-63241
NC_010801:550270:5506995506995518081110Burkholderia multivorans ATCC 17616 chromosome 3, completeputative flavoprotein7e-60231
NC_010943:2422838:2456194245619424572911098Stenotrophomonas maltophilia K279a, complete genomeputative monooxygenase3e-59229
NC_011071:2207385:2225117222511722262021086Stenotrophomonas maltophilia R551-3, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase2e-58226
NC_011586:268927:2699632699632710301068Acinetobacter baumannii AB0057 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase4e-58225
NC_010410:3606826:3688763368876336898841122Acinetobacter baumannii AYE, complete genomeputative monooxygenase4e-58225
NC_017986:331610:3514083514083526011194Pseudomonas putida ND6 chromosome, complete genomemonooxygenase1e-57224
NC_002947:2157648:2172418217241821735001083Pseudomonas putida KT2440, complete genomemonooxygenase, putative2e-57223
NC_006087:2326143:234743523474352348349915Leifsonia xyli subsp. xyli str. CTCB07, complete genomeflavine-dependent monooxygenase2e-57223
NC_015690:3477573:3522067352206735231881122Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein1e-40167
NC_010943:2422838:2449350244935024503961047Stenotrophomonas maltophilia K279a, complete genomeputative monooxygenase1e-32140
NC_017030:3091313:3127717312771731288171101Corallococcus coralloides DSM 2259 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase3e-31135
NC_019904:2095971:2113868211386821149111044Echinicola vietnamensis DSM 17526 chromosome, complete genomeK+ transport protein1e-27124
NC_014210:5309121:5332527533252753335731047Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,FAD-dependent pyridine nucleotide-disulfide oxidoreductase3e-26119
NC_016887:1949927:1954250195425019552991050Nocardia cyriacigeorgica GUH-2, complete genomeputative FAD-dependent oxidoreductase4e-25115
NC_020272:3396800:3407114340711434081511038Bacillus amyloliquefaciens IT-45, complete genomeputative flavoprotein involved in K+ transport5e-24112
NC_000964:2702376:2721993272199327230301038Bacillus subtilis subsp. subtilis str. 168, complete genomepotassium uptake1e-23111
NC_009831:4539952:4555305455530545563901086Shewanella sediminis HAW-EB3, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase7e-24111
NC_015167:3469968:3490155349015534911891035Cellulophaga lytica DSM 7489 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-23110
NC_019842:484933:5307055307055317421038Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein2e-23110
NC_009725:496443:5389395389395399761038Bacillus amyloliquefaciens FZB42, complete genomeTrkA3e-23109
NC_020244:2509000:2537432253743225384691038Bacillus subtilis XF-1, complete genomeputative oxidoreductase3e-23109
NC_006510:591339:6061656061656072111047Geobacillus kaustophilus HTA426, complete genomepotassium transporter (Trk family)2e-23109
NC_016593:596500:6097886097886108341047Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeputative oxidoreductase czcO-like protein2e-23109
NC_019896:1483073:1502800150280015038371038Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein8e-23108
NC_020410:495184:5230205230205240571038Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative oxidoreductase8e-23108
NC_015733:5909821:592116159211615921703543Pseudomonas putida S16 chromosome, complete genomeputative flavin-binding monooxygenase involved in arsenic resistance3e-1996.7
NC_015434:2527412:2548551254855125498731323Verrucosispora maris AB-18-032 chromosome, complete genomeflavin-containing monooxygenase4e-1685.9
NC_009654:4716417:4726273472627347277151443Marinomonas sp. MWYL1, complete genomeflavin-containing monooxygenase7e-1685.1
NC_009338:4869700:4902548490254849041371590Mycobacterium gilvum PYR-GCK chromosome, complete genomecyclohexanone monooxygenase6e-1582
NC_015376:3320818:3328366332836633308492484Burkholderia gladioli BSR3 chromosome chromosome 2, completeAlpha/beta hydrolase fold-3 domain protein2e-1480.1
NC_016947:2380500:2415064241506424165811518Mycobacterium intracellulare MOTT-02 chromosome, complete genomeputative monooxygenase4e-1375.9
NC_010612:3813481:3823902382390238254191518Mycobacterium marinum M, complete genomemonooxygenase5e-1375.5
NC_017904:2379387:2436260243626024377771518Mycobacterium sp. MOTT36Y chromosome, complete genomemonooxygenase5e-1375.5
NC_013501:1691532:1707636170763617089821347Rhodothermus marinus DSM 4252, complete genomeFlavin-containing monooxygenase1e-1274.7
NC_004129:4596040:4618763461876346212822520Pseudomonas fluorescens Pf-5, complete genomemonooxygenase, flavin-binding1e-1274.7
NC_002516:2306776:2307957230795723094321476Pseudomonas aeruginosa PAO1, complete genomeprobable flavin-binding monooxygenase2e-1273.6
NC_014032:374426:3766693766693782071539Salinibacter ruber M8 chromosome, complete genomeFAD dependent oxidoreductase3e-1273.2
NC_007794:262402:2624022624022641231722Novosphingobium aromaticivorans DSM 12444, complete genomeflavin-containing monooxygenase FMO3e-1273.2
NC_007677:324000:3244543244543259921539Salinibacter ruber DSM 13855, complete genomeFAD dependent oxidoreductase, putative6e-1272
NC_016604:5228500:5244230524423052457471518Mycobacterium rhodesiae NBB3 chromosome, complete genomeputative flavoprotein involved in K+ transport6e-1272
NC_006625:144929:1568451568451581101266Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequencehypothetical protein6e-1272
NC_014841:41773:6210162101633661266Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceFAD-dependent pyridine nucleotide-disulfide oxidoreductase1e-1171.2
NC_010612:3813481:3825467382546738269661500Mycobacterium marinum M, complete genomemonooxygenase2e-1170.5
NC_017904:2379387:2434711243471124362101500Mycobacterium sp. MOTT36Y chromosome, complete genomemonooxygenase2e-1170.5
NC_010512:1196616:1209772120977212110941323Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceFAD dependent oxidoreductase3e-1169.7
NC_011740:2859933:2879786287978628811141329Escherichia fergusonii ATCC 35469, complete genomeputative pyridine nucleotide-disulphide oxidoreductase4e-1169.3
NC_012811:1:1536015360166521293Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative flavin-containing monooxygenase4e-1169.3
NC_011283:1811000:1872685187268518739531269Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein4e-1169.3
NC_017171:1331794:134884213488421349639798Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomehypothetical protein6e-1168.9
NC_016948:1696000:1697044169704416985461503Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein5e-1168.9
NC_017904:1683471:1684403168440316859051503Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein5e-1168.9
NC_016906:2871272:2887374288737428889091536Gordonia polyisoprenivorans VH2 chromosome, complete genome4-hydroxyacetophenone monooxygenase HapE8e-1168.2
NC_011884:2817054:2828814282881428306431830Cyanothece sp. PCC 7425, complete genomeflavin-containing monooxygenase FMO1e-1067.8
NC_003911:3864852:3890849389084938921231275Silicibacter pomeroyi DSS-3, complete genomehypothetical protein1e-1067.8
NC_016604:5228500:5245793524579352472861494Mycobacterium rhodesiae NBB3 chromosome, complete genomeputative flavoprotein involved in K+ transport1e-1067.8
NC_017171:1331794:1355846135584613573961551Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeflavoprotein2e-1067
NC_010397:2063561:2072113207211320736001488Mycobacterium abscessus chromosome Chromosome, complete sequencePutative monooxygenase5e-1065.9
NC_018583:95388:1062521062521077721521Gordonia sp. KTR9 plasmid pGKT3, complete sequenceputative flavoprotein involved in K+ transport6e-1065.5
NC_004463:8401060:8432724843272484345231800Bradyrhizobium japonicum USDA 110, complete genomeputative monooxygenase protein9e-1065.1
NC_010557:1030319:1033718103371810350641347Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceFAD-dependent pyridine nucleotide-disulphide oxidoreductase7e-1065.1
NC_008314:477722:5200065200065212591254Ralstonia eutropha H16 chromosome 2, complete sequencepredicted flavoprotein involved in K+ transport1e-0964.7
NC_007963:1582089:1601858160185816031441287Chromohalobacter salexigens DSM 3043, complete genomeDimethylaniline monooxygenase (N-oxide forming)1e-0964.3
NC_016604:5067562:5104143510414351059481806Mycobacterium rhodesiae NBB3 chromosome, complete genomeputative flavoprotein involved in K+ transport1e-0964.3
NC_007963:2644930:2678843267884326801891347Chromohalobacter salexigens DSM 3043, complete genomeflavin-containing monooxygenase FMO2e-0963.9
NC_008268:3233961:3240692324069232423411650Rhodococcus sp. RHA1, complete genomeprobable cyclohexanone monooxygenase2e-0963.9
NC_012803:2195808:2229430222943022307671338Micrococcus luteus NCTC 2665, complete genomepredicted flavoprotein involved in K+ transport2e-0963.9
NC_010397:2063561:207365120736512074250600Mycobacterium abscessus chromosome Chromosome, complete sequencePutative monooxygenase2e-0963.5
NC_015859:1069116:1069116106911610709871872Corynebacterium variabile DSM 44702 chromosome, complete genomeputative dimethylaniline monooxygenase3e-0963.2
NC_008268:3418000:3435990343599034376211632Rhodococcus sp. RHA1, complete genomecyclopentanone 1,2-monooxygenase3e-0963.2
NC_009342:841500:8501258501258514261302Corynebacterium glutamicum R chromosome, complete genomehypothetical protein5e-0962.4
NC_016604:5067562:5102650510265051041461497Mycobacterium rhodesiae NBB3 chromosome, complete genomeputative flavoprotein involved in K+ transport6e-0962
NC_012857:1097400:1101601110160111031271527Ralstonia pickettii 12D chromosome 2, complete genomeflavin-containing monooxygenase FMO8e-0961.6
NC_016947:2380500:2413532241353224150191488Mycobacterium intracellulare MOTT-02 chromosome, complete genomeputative monooxygenase1e-0861.2
NC_014210:5309121:5329758532975853312511494Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,FAD dependent oxidoreductase2e-0860.8
NC_016947:2210339:2238573223857322400601488Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein4e-0859.3
NC_009959:55567:3833383356321800Dinoroseobacter shibae DFL 12 plasmid pDSHI05, complete sequencemonooxygenase protein, putative5e-0859.3
NC_015594:489367:4916474916474934851839Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeFAD-dependent pyridine nucleotide-disulfide oxidoreductase9e-0858.2
NC_012660:5793200:5817889581788958203872499Pseudomonas fluorescens SBW25 chromosome, complete genomeputative flavin-binding monooxygenase-like protein9e-0858.2
NC_020209:47504:8249482494849262433Pseudomonas poae RE*1-1-14, complete genomeputative flavin-binding monooxygenase-like protein1e-0757.8
NC_018691:2214464:2232282223228222337841503Alcanivorax dieselolei B5 chromosome, complete genomeMonooxygenase, flavin-binding family1e-0757.8
NC_007794:1504449:1521727152172715233761650Novosphingobium aromaticivorans DSM 12444, complete genomeCyclohexanone monooxygenase3e-0756.2
NC_009720:4367584:4390055439005543914701416Xanthobacter autotrophicus Py2, complete genomeputative secreted protein5e-0755.8
NC_018691:2254566:2254566225456622562151650Alcanivorax dieselolei B5 chromosome, complete genomeFAD dependent oxidoreductase domain protein4e-0755.8
NC_007953:353496:3663273663273679701644Burkholderia xenovorans LB400 chromosome 3, complete sequenceCyclohexanone monooxygenase4e-0755.8
NC_013757:1888850:1911161191116119128821722Geodermatophilus obscurus DSM 43160, complete genomeFAD dependent oxidoreductase9e-0754.7
NC_020302:85821:9518795187967071521Corynebacterium halotolerans YIM 70093 = DSM 44683, completeflavin-binding monooxygenase-like protein2e-0654.3
NC_008260:187269:2018222018222033481527Alcanivorax borkumensis SK2, complete genomemonooxygenase, putative2e-0653.5
NC_009921:3455783:3466550346655034680641515Frankia sp. EAN1pec, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase5e-0652.4