Pre_GI: BLASTP Hits

Some Help

Query: NC_007005:5500196:5507043 Pseudomonas syringae pv. syringae B728a, complete genome

Start: 5507043, End: 5508014, Length: 972

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009800:2651730:2658945265894526603361392Escherichia coli HS, complete genomeP-type conjugative transfer protein TrbL5e-1995.5
NC_008800:1300500:1316984131698413183841401Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative conjugal transfer protein2e-1893.2
NC_020063:3690308:3726329372632937277231395Enterobacteriaceae bacterium strain FGI 57, complete genomeP-type conjugative transfer protein TrbL4e-1892.4
NC_008463:1293079:1314366131436613159881623Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative mating pair formation protein TrbL6e-1685.1
NC_008782:2683989:2701523270152327031211599Acidovorax sp. JS42, complete genomeTrbL/VirB6 plasmid conjugal transfer protein2e-1584
NC_008344:2374761:2383773238377323852001428Nitrosomonas eutropha C91, complete genomeTrbL/VirB6 plasmid conjugal transfer protein4e-1479
NC_008344:669498:6800606800606814871428Nitrosomonas eutropha C91, complete genomeTrbL/VirB6 plasmid conjugal transfer protein4e-1479
NC_004741:2593012:260723726072372608043807Shigella flexneri 2a str. 2457T, complete genomeputative mating pair formation protein9e-1477.8
NC_013722:1816561:1856743185674318581701428Xanthomonas albilineans, complete genomeputative conjugal transfer protein1e-1377.4
NC_013456:3011518:3023677302367730252811605Vibrio sp. Ex25 chromosome 1, complete genomeconjugative transfer protein TrbL2e-1376.6
NC_016602:2854107:2867942286794228695641623Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein2e-1376.6
NC_016745:2028424:2045659204565920472781620Oceanimonas sp. GK1 chromosome, complete genomeTrbL/VirB6 plasmid conjugal transfer protein3e-1376.3
NC_006513:38818:4999349993515971605Azoarcus sp. EbN1, complete genomeplasmid like TrbL protein, component of conjugation system3e-1376.3
NC_006350:3865584:3877520387752038789501431Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative plasmid conjugal transfer protein2e-0963.9
NC_011000:183928:1953651953651967921428Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative plasmid conjugal transfer protein2e-0963.9
NC_006371:1743982:1752944175294417542571314Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical TrbL protein3e-0652.8