Pre_GI: BLASTP Hits

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Query: NC_005126:3812054:3815368 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 3815368, End: 3817845, Length: 2478

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:3812054:3835590383559038380792490Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein01412
NC_012962:3568046:3582829358282935853062478Photorhabdus asymbiotica, complete genomehypothetical protein01203
NC_012962:3568046:3590712359071235931892478Photorhabdus asymbiotica, complete genomehypothetical protein01184
NC_015663:1:3502435024374742451Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein0763
NC_011745:258727:2695152695152711911677Escherichia coli ED1a chromosome, complete genomehypothetical protein6e-101369
NC_020829:1307736:1313516131351613159992484Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein1e-94348
NC_007511:1094050:1106133110613311085082376Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein2e-57224
NC_010717:1343000:1357398135739813598062409Xanthomonas oryzae pv. oryzae PXO99A, complete genomehypothetical protein2e-52208
NC_008390:235155:2436032436032457832181Burkholderia cepacia AMMD chromosome 1, complete sequencehypothetical protein4e-52207
NC_012856:1585989:1595906159590615982122307Ralstonia pickettii 12D chromosome 1, complete genomehypothetical protein1e-48195
NC_014931:6203872:6214755621475562167101956Variovorax paradoxus EPS chromosome, complete genomeProtein of unknown function DUF22352e-47191
NC_008314:1275617:1287839128783912902292391Ralstonia eutropha H16 chromosome 2, complete sequencehypothetical protein3e-46187
NC_010717:3868000:3883803388380338859652163Xanthomonas oryzae pv. oryzae PXO99A, complete genomehypothetical protein5e-44179
NC_007651:3064530:3089237308923730916392403Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein1e-42175
NC_007651:3064530:3092917309291730953252409Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein2e-35151
NC_005085:2609934:2620938262093826224611524Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein4e-29130
NC_015376:1185000:1194448119444811960401593Burkholderia gladioli BSR3 chromosome chromosome 2, completehypothetical protein1e-25118
NC_015381:1:1210612106136981593Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein8e-23109
NC_005085:1:1497314973165111539Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein5e-22107
NC_010717:3868000:388662438866243887523900Xanthomonas oryzae pv. oryzae PXO99A, complete genomehypothetical protein9e-1996.3
NC_009648:1956070:1975788197578819774881701Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein8e-1376.6
NC_014532:3596097:3603449360344936052421794Halomonas elongata DSM 2581, complete genomehypothetical protein2e-1275.1
NC_017192:2216914:2225570222557022274321863Arcobacter sp. L, complete genomehypothetical protein6e-1273.6
NC_012721:240000:2516562516562539112256Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein5e-1273.6
NC_010084:3173757:3189494318949431917882295Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein9e-1169.7
NC_010804:324396:3329843329843352782295Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein9e-1169.7
NC_015733:1793399:1814215181421518155221308Pseudomonas putida S16 chromosome, complete genomehypothetical protein7e-1066.6
NC_004578:3921199:3925206392520639267741569Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein8e-1066.6
NC_017506:971482:9744889744889755131026Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein3e-0964.7
NC_016602:2037162:2049294204929420514172124Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein1e-0862.8
NC_009350:137645:1530971530971546921596Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completehypothetical protein1e-0862.4