Pre_GI: BLASTP Hits

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Query: NC_004578:895019:918744 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 918744, End: 919160, Length: 417

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:866157:891099891099891575477Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein1e-59228
NC_007005:1605000:161909816190981619571474Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF15258e-57218
NC_018080:5091772:517254351725435172974432Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein6e-23105
NC_008463:5313527:534135753413575341788432Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein6e-22102
NC_008344:49039:766917669177122432Nitrosomonas eutropha C91, complete genomeprotein of unknown function DUF15252e-21101
NC_004129:5373886:544168854416885442116429Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-21100
NC_013421:1744928:176245017624501762884435Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF15252e-2097.8
NC_009138:1974935:203137820313782031824447Herminiimonas arsenicoxydans, complete genomehypothetical protein4e-2096.7
NC_010002:4572573:457323245732324573678447Delftia acidovorans SPH-1, complete genomeprotein of unknown function DUF15257e-2095.9
NC_010170:1551923:155160015516001552046447Bordetella petrii, complete genomehypothetical protein1e-1995.1
NC_014640:1179382:117899311789931179385393Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein2e-1994.4
NC_012912:483390:499311499311499769459Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF15253e-1994
NC_012560:3698697:369869736986973699062366Azotobacter vinelandii DJ, complete genomehypothetical protein1e-1892
NC_021150:3698696:369869636986963699061366Azotobacter vinelandii CA6, complete genomehypothetical protein1e-1892
NC_012691:2614603:267171326717132672213501Tolumonas auensis DSM 9187, complete genomeprotein of unknown function DUF15251e-1788.2
NC_010170:1417615:143554814355481435997450Bordetella petrii, complete genomehypothetical protein7e-1785.9
NC_015726:2862500:287638128763812876821441Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein1e-1685.1
NC_011662:1017933:103637210363721036821450Thauera sp. MZ1T, complete genomeprotein of unknown function DUF15252e-1580.9
NC_006513:1379735:143348014334801433932453Azoarcus sp. EbN1, complete genomehypothetical protein1e-1478.6
NC_010688:2850164:284972128497212850167447Xanthomonas campestris pv. campestris, complete genomePutative secreted protein6e-1476.3
NC_012214:3303955:332057833205783320985408Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein2e-0961.2
NC_018691:2288000:230840123084012308859459Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein6e-0959.7
NC_013971:3117000:312094831209483121355408Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein9e-0958.9
NC_013961:629307:649946649946650353408Erwinia amylovora, complete genomehypothetical protein9e-0958.9
NC_014029:331919:378540378540378944405Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-0857.8
NC_003198:4453457:445345744534574453849393Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-0857.8
NC_012125:4536383:453638345363834536775393Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-0857.8
NC_016832:4425330:442533044253304425722393Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-0857.8
NC_004547:639726:639329639329639733405Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein7e-0855.8
NC_015566:345084:346474346474346878405Serratia sp. AS12 chromosome, complete genomeintegrating conjugative element protein9e-0855.5
NC_015567:346500:346639346639347043405Serratia sp. AS9 chromosome, complete genomeintegrating conjugative element protein9e-0855.5
NC_014228:3442159:345460234546023455000399Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein5e-0753.1
NC_015554:4648919:467365946736594674132474Alteromonas sp. SN2 chromosome, complete genomehypothetical protein2e-0651.6
NC_012779:346998:355280355280355675396Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-0651.2
NC_013421:701005:718870718870719274405Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF15253e-0650.8
NC_013892:1457500:146455614645561464954399Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-0650.4
NC_010554:2789722:281144628114462811886441Proteus mirabilis HI4320, complete genomelipoprotein5e-0650.1
NC_014228:3353896:336493633649363365334399Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein9e-0648.9