Pre_GI: BLASTP Hits

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Query: NC_004547:3207776:3242708 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 3242708, End: 3242992, Length: 285

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:103371:110246110246110530285Serratia marcescens WW4, complete genomehypothetical protein2e-35147
NC_017249:5255967:526412152641215264510390Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-22104
NC_017249:9198000:920434392043439204639297Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-2097.4
NC_004463:9087290:910278791027879103083297Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein2e-2097.4
NC_017249:9155500:916279091627909163074285Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-1889.7
NC_004463:9031331:903959890395989039882285Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein4e-1889.7
NC_007510:1921251:193942619394261939734309Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein1e-1478.6
NC_010572:82000:127755127755128036282Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-0650.4
NC_010572:8408500:841789484178948418175282Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-0650.4