Pre_GI: BLASTP Hits

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Query: NC_004547:1873390:1903582 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1903582, End: 1903959, Length: 378

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:1987291:200946120094612009838378Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein4e-46182
NC_011294:2053991:207485220748522075229378Salmonella enterica subsp. enterica serovar Enteritidis strexported protein7e-45178
NC_011601:2139188:215561321556132155990378Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein4e-44176
NC_011274:2044000:206598020659802066357378Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein7e-44175
NC_011205:2180598:220208022020802202247168Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-2098.6
NC_016831:947281:968181968181968348168Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-2098.6
NC_013941:3300000:332900133290013329375375Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-1788.6
NC_009792:3245368:328040132804013280775375Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-1788.6
NC_012917:1840172:185987318598731860247375Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein2e-1787.4
NC_002695:3468873:349122434912243491619396Escherichia coli O157:H7 str. Sakai, complete genomehypothetical lipoprotein5e-1579.7
NC_009801:2898426:292578929257892926175387Escherichia coli E24377A, complete genomeputative lipoprotein3e-1373.9
NC_009792:3665369:368431136843113684697387Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1270.9
NC_012880:3421500:343251534325153432901387Dickeya dadantii Ech703, complete genomehypothetical protein2e-1168.2
NC_011094:2791719:280971128097112810097387Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-1167.8
NC_010067:191190:206088206088206474387Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-1166.2
NC_011741:4570498:458703045870304587416387Escherichia coli IAI1 chromosome, complete genomehypothetical protein7e-1165.9
CU928160:4570498:458703045870304587416387Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative exported protein7e-1165.9
NC_002655:3538656:355867035586703558948279Escherichia coli O157:H7 EDL933, complete genomehypothetical protein6e-1062.8
NC_011353:3573641:359548735954873595765279Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein6e-1062.8
NC_013008:3525428:355036235503623550640279Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein6e-1062.8
NC_008800:1090000:110474711047471105136390Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative lipoprotein9e-0958.9
NC_017047:1934430:194128519412851941674390Rahnella aquatilis HX2 chromosome, complete genomelipoprotein1e-0858.5
NC_013173:1712138:171841517184151718819405Desulfomicrobium baculatum DSM 4028, complete genomelipoprotein1e-0755.1