Pre_GI: BLASTP Hits

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Query: NC_004463:7683426:7698057 Bradyrhizobium japonicum USDA 110, complete genome

Start: 7698057, End: 7698800, Length: 744

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004347:2668000:268338226833822684149768Shewanella oneidensis MR-1, complete genometranscriptional regulator-related protein3e-26118
NC_010511:1590500:159133615913361592145810Methylobacterium sp. 4-46 chromosome, complete genomeCrp/FNR family transcriptional regulator6e-25114
NC_011004:4073916:410174141017414102538798Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, Crp/Fnr family6e-25114
NC_004347:2668000:268256426825642683256693Shewanella oneidensis MR-1, complete genometranscriptional regulator-related protein2e-24112
NC_015410:3093465:309680130968013097517717Pseudomonas mendocina NK-01 chromosome, complete genomecyclic nucleotide-binding domain-containing protein3e-24112
NC_007348:2115152:213491821349182135640723Ralstonia eutropha JMP134 chromosome 2, complete sequenceCyclic nucleotide-binding4e-24111
NC_008340:1303607:130488413048841305636753Alkalilimnicola ehrlichei MLHE-1, complete genometranscriptional regulator, Crp/Fnr family1e-23110
NC_015572:65597:732007320073907708Methylomonas methanica MC09 chromosome, complete genomeCrp/Fnr family transcriptional regulator6e-24110
NC_009348:2247500:226501522650152265785771Aeromonas salmonicida subsp. salmonicida A449, complete genomeCrp/FNR family transcriptional regulator2e-23109
NC_019940:2731105:273579527357952736628834Thioflavicoccus mobilis 8321 chromosome, complete genomecAMP-binding protein5e-23108
NC_015572:2713599:271721227172122717922711Methylomonas methanica MC09 chromosome, complete genomeCrp/Fnr family transcriptional regulator1e-22107
NC_010508:1865602:187469418746941875413720Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, Crp/Fnr family7e-22104
NC_010508:1865602:188357918835791884298720Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, Crp/Fnr family7e-22104
NC_015410:3093465:309763730976373098365729Pseudomonas mendocina NK-01 chromosome, complete genomeCrp/Fnr family transcriptional regulator1e-21103
NC_008543:2666846:267837226783722679091720Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, Crp/Fnr family1e-21103
NC_008061:2582000:258789825878982588617720Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, Crp/Fnr family1e-21103
NC_016112:2903767:290376729037672904519753Methylomicrobium alcaliphilum chromosome, complete genomeregulatory protein, Crp2e-21102
NC_011004:4183993:418711041871104187874765Rhodopseudomonas palustris TIE-1, complete genomeputative transcriptional regulator, Crp/Fnr family3e-21102
NC_015723:1347946:136596913659691366688720Cupriavidus necator N-1 chromosome 2, complete sequencetranscriptional regulator-like protein3e-21102
NC_010515:1375091:139348513934851394216732Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, Crp/Fnr family8e-21100
NC_008061:2368517:238764223876422388373732Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, Crp/Fnr family8e-21100
NC_008543:2871747:287861228786122879343732Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, Crp/Fnr family8e-21100
NC_016112:2903767:290480329048032905516714Methylomicrobium alcaliphilum chromosome, complete genomecyclic nucleotide-binding protein2e-2099.4
NC_012792:707864:716714716714717454741Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, Crp/Fnr family5e-2098.2
NC_010172:798923:845979845979846689711Methylobacterium extorquens PA1, complete genomecyclic nucleotide-binding5e-2097.8
NC_016585:1004000:100678210067821007495714Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencehypothetical protein8e-2097.4
NC_010172:798923:847347847347848069723Methylobacterium extorquens PA1, complete genomecyclic nucleotide-binding9e-1994
NC_012988:769981:822134822134822856723Methylobacterium extorquens DM4, complete genomeCrp/Fnr family transcriptional regulator2e-1892.8
NC_017249:8576294:859511085951108595946837Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-1789
NC_011757:3540992:356527335652733565983711Methylobacterium chloromethanicum CM4, complete genomecyclic nucleotide-binding protein4e-1788.2
NC_010725:4035397:410721241072124107925714Methylobacterium populi BJ001, complete genomecyclic nucleotide-binding protein5e-1788.2
NC_015675:6651899:666667866666786667400723Mesorhizobium opportunistum WSM2075 chromosome, complete genomeputative Crp/Fnr family transcriptional regulator8e-1787.4
NC_019973:6028795:604096760409676041689723Mesorhizobium australicum WSM2073, complete genomecAMP-binding protein8e-1787.4
NC_012988:769981:820768820768821478711Methylobacterium extorquens DM4, complete genomeCrp/Fnr family transcriptional regulator1e-1687
NC_012792:707864:717576717576718283708Variovorax paradoxus S110 chromosome 2, complete genomeputative transcriptional regulator, Crp/Fnr family1e-1686.7
NC_010508:1865602:1870099187009918711211023Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, Crp/Fnr family1e-1686.7
NC_004463:1683000:1697964169796416990671104Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein2e-1686.3
NC_011894:3090000:309865230986523099380729Methylobacterium nodulans ORS 2060, complete genomecyclic nucleotide-binding protein9e-1684
NC_009668:1726000:173410217341021734833732Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencecyclic nucleotide-binding protein5e-1581.6
NC_012988:32996:495664956650198633Methylobacterium extorquens DM4, complete genomeCrp/Fnr family transcriptional regulator5e-1581.6
NC_014923:2888723:290438229043822905143762Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completecyclic nucleotide-binding protein1e-1480.1
NC_016631:4731865:474675347467534747466714Granulicella mallensis MP5ACTX8 chromosome, complete genomeCrp family transcriptional regulator1e-1480.1
NC_011757:3540992:357307935730793573792714Methylobacterium chloromethanicum CM4, complete genomecyclic nucleotide-binding protein3e-1375.5
NC_011757:39881:610946109461807714Methylobacterium chloromethanicum CM4, complete genomecyclic nucleotide-binding protein3e-1375.5
NC_011757:3540992:356428535642853565055771Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, Crp/Fnr family4e-1375.1
NC_009668:1726000:173339517333951734105711Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceCRP/FNR family transcriptional regulator8e-1374.3
NC_010511:5424004:544362054436205444387768Methylobacterium sp. 4-46 chromosome, complete genomecyclic nucleotide-binding protein7e-1374.3
NC_011894:6220791:624097662409766241686711Methylobacterium nodulans ORS 2060, complete genomeputative transcriptional regulator, Crp/Fnr family1e-1273.2
NC_010172:798923:844067844067844780714Methylobacterium extorquens PA1, complete genomehypothetical protein2e-1169.7
NC_012988:769981:818853818853819566714Methylobacterium extorquens DM4, complete genomeCrp/Fnr family transcriptional regulator9e-1167.4
NC_010172:57500:848768487685589714Methylobacterium extorquens PA1, complete genomehypothetical protein2e-1066.2
NC_011894:4066926:410721041072104107758549Methylobacterium nodulans ORS 2060, complete genomecyclic nucleotide-binding protein4e-0858.5