Pre_GI: BLASTP Hits

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Query: NC_004337:3590323:3848072 Shigella flexneri 2a str. 301, complete genome

Start: 3848072, End: 3849247, Length: 1176

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009648:4497749:4520075452007545212411167Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative xylanase2e-149529
NC_012917:2786283:2790547279054727917131167Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeglycoside hydrolase family 13 domain protein2e-149528
NC_013421:2972269:2993387299338729945711185Pectobacterium wasabiae WPP163, complete genomeglycoside hydrolase family 13 domain protein8e-147520
NC_020260:3931567:3955345395534539565171173Cronobacter sakazakii Sp291, complete genomexylanase2e-137488
NC_014041:3715000:3741007374100737432472241Zunongwangia profunda SM-A87 chromosome, complete genomeputative esterase4e-35149
NC_015510:644500:6446736446736465981926Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeesterase7e-35148
NC_014655:2533929:2546689254668925485061818Leadbetterella byssophila DSM 17132 chromosome, complete genomeesterase3e-32139
NC_009614:29604:4245342453449662514Bacteroides vulgatus ATCC 8482 chromosome, complete genomeglycoside hydrolase5e-32139
NC_016627:2799453:2811117281111728126161500Clostridium clariflavum DSM 19732 chromosome, complete genomeenterochelin esterase-like enzyme4e-27122
NC_017059:3163319:316331931633193164236918Rhodospirillum photometricum DSM 122, complete genomePutative esterase2e-1480.9
NC_008463:2848568:2878349287834928799291581Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-1376.6
NC_011770:3049830:3079734307973430813141581Pseudomonas aeruginosa LESB58, complete genomehypothetical protein4e-1376.3
NC_010003:2029416:203501520350152035845831Petrotoga mobilis SJ95, complete genomeputative esterase5e-1375.9
NC_009656:2801885:2836521283652128381011581Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein7e-1375.5
NC_014328:3823902:382606238260623826853792Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative esterase8e-1375.1
NC_018080:2732962:2746591274659127481711581Pseudomonas aeruginosa DK2 chromosome, complete genomeenterochelin esterase-related enzyme9e-1375.1
NC_012483:1297799:1311052131105213121641113Acidobacterium capsulatum ATCC 51196, complete genomePutative esterase3e-1170.1
NC_014817:1063173:1063173106317310641981026Asticcacaulis excentricus CB 48 chromosome 2, complete sequenceesterase4e-1066.2
NC_010001:1806000:1815592181559218167371146Clostridium phytofermentans ISDg, complete genomeputative esterase3e-0756.6
NC_019968:552440:5551725551725566681497Prevotella dentalis DSM 3688 chromosome 2, complete sequenceputative esterase8e-0755.1
NC_002516:2750128:275286627528662753465600Pseudomonas aeruginosa PAO1, complete genomehypothetical protein8e-0755.1
NC_013161:1023716:103192210319221032857936Cyanothece sp. PCC 8802, complete genomeputative esterase1e-0654.7
NC_011726:1023690:103189610318961032831936Cyanothece sp. PCC 8801, complete genomeputative esterase1e-0654.7