Pre_GI: BLASTP Hits

Some Help

Query: NC_004129:1014986:1027247 Pseudomonas fluorescens Pf-5, complete genome

Start: 1027247, End: 1028509, Length: 1263

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015942:1824847:1843104184310418443571254Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase3e-34146
NC_011206:2685499:2721519272151927227931275Acidithiobacillus ferrooxidans ATCC 53993, complete genomeintegral membrane sensor signal transduction histidine kinase7e-31135
NC_011761:2785660:2821701282170128229541254Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completesensor histidine kinase8e-31135
NC_007404:2743877:2769192276919227704511260Thiobacillus denitrificans ATCC 25259, complete genomePeriplasmic Sensor Signal Transduction Histidine Kinase3e-27123
NC_016616:1233555:1234133123413312355331401Dechlorosoma suillum PS chromosome, complete genomesignal transduction histidine kinase7e-26118
NC_016112:3190891:3196565319656531979831419Methylomicrobium alcaliphilum chromosome, complete genomeIntegral membrane sensor signal transduction histidine kinase1e-23111
NC_007645:1378337:1397099139709913985171419Hahella chejuensis KCTC 2396, complete genomeSignal transduction histidine kinase2e-1997.1
NC_008380:58232:5823258232595601329Rhizobium leguminosarum bv. viciae 3841, complete genomeputative two-component regulator sensor histidine kinase transcriptional regulator5e-1169.3
NC_009952:3596399:3612224361222436136151392Dinoroseobacter shibae DFL 12, complete genomesensor histidine kinase RegB6e-1168.9
NC_010994:57362:5736257362586721311Rhizobium etli CIAT 652, complete genometwo-component sensor histidine kinase protein8e-1168.6
NC_012808:420334:4447154447154461091395Methylobacterium extorquens AM1, complete genometwo component sensor histidine kinase, RegS1e-0964.7
NC_010172:632180:6570696570696584631395Methylobacterium extorquens PA1, complete genomeATP-binding region ATPase domain protein3e-0963.2