Pre_GI: BLASTP Hits

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Query: NC_004088:1196875:1208849 Yersinia pestis KIM, complete genome

Start: 1208849, End: 1210204, Length: 1356

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3240379:3259161325916132605041344Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative O-unit flippase0728
NC_014029:3501500:3519972351997235213151344Yersinia pestis Z176003 chromosome, complete genomeputative O-unit flippase0728
NC_010634:1175404:1187506118750611888491344Yersinia pseudotuberculosis PB1/+, complete genomeO-unit flippase-like protein0721
NC_009708:3411153:3429631342963134309741344Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeO-unit flippase protein Wzx0665
NC_006155:1191307:1205339120533912066821344Yersinia pseudotuberculosis IP 32953, complete genomeputative O-unit flippase0665
NC_008150:2878450:2897240289724028984781239Yersinia pestis Antiqua, complete genomeputative O-unit flippase0656
NC_008149:1122693:1136816113681611380541239Yersinia pestis Nepal516, complete genomeO-unit flippase0656
NC_009381:3094939:3113713311371331149511239Yersinia pestis Pestoides F chromosome, complete genomeO-unit flippase0654
NC_014624:2211771:2211771221177122132011431Eubacterium limosum KIST612 chromosome, complete genomepolysaccharide biosynthesis protein3e-27123
NC_015578:61820:7085970859722201362Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein9e-27121
NC_015873:924392:9498669498669512901425Megasphaera elsdenii DSM 20460, complete genomehypothetical protein3e-25116
NC_015738:760309:7731497731497745821434Eggerthella sp. YY7918, complete genomehypothetical protein1e-23111
NC_015052:471944:4875504875504889831434Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein7e-2099
NC_014355:2321957:2332141233214123335561416Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-1067.8
NC_015942:1167785:1180991118099111825441554Acidithiobacillus ferrivorans SS3 chromosome, complete genomepolysaccharide biosynthesis protein1e-0655.1