Pre_GI: BLASTP Hits

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Query: NC_003888:7659639:7665653 Streptomyces coelicolor A3(2), complete genome

Start: 7665653, End: 7666519, Length: 867

Host Lineage: Streptomyces coelicolor; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Well-studied antiobiotic-producing bacterium. These bacteria are widely distributed in nature, especially in the soil. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This bacterium is a soil-dwelling filamentous organism responsible for producing more than half of the known natural antibiotics. It is a well-studied species of Streptomyces and genetically is the best known representative.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016582:10137951:101512251015122510151935711Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-1893.2
NC_013929:2536255:254685725468572547795939Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1687.4
NC_016111:2912962:292503029250302925974945Streptomyces cattleya NRRL 8057, complete genomehypothetical protein3e-1479.3
NC_003888:7659639:766708476670847667884801Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-1273.6
NC_003888:7561923:762328576232857624064780Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-0860.1
NC_013929:2536255:254593625459362546739804Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein7e-0754.7
NC_013929:2536255:254178025417802542565786Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-0653.1