Pre_GI: BLASTP Hits

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Query: NC_003198:4397074:4415909 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4415909, End: 4417252, Length: 1344

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:4368948:4387783438778343891261344Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein0925
NC_012125:4481808:4503046450304645043891344Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein0925
NC_004631:4381724:4400559440055944019021344Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein0925
NC_010102:4477836:4498932449893245001641233Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-96352
NC_012779:305969:3265393265393277591221Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-93343
NC_009708:4215500:4215620421562042168191200Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-89330
NC_014121:398012:4223464223464235841239Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-88326
NC_013892:3278647:3289715328971532909381224Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein6e-87321
NC_013892:1503162:1506339150633915075621224Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-86320
NC_014228:3505320:3517133351713335183561224Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein3e-86319
NC_014029:331919:3510313510313523021272Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-85317
NC_009832:358291:3617403617403630111272Serratia proteamaculans 568, complete genomehypothetical protein2e-84313
NC_014228:3391500:3412393341239334136041212Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein3e-84312
NC_009832:4564752:4564752456475245659991248Serratia proteamaculans 568, complete genomehypothetical protein7e-84311
NC_015567:313035:3165053165053177761272Serratia sp. AS9 chromosome, complete genomehypothetical protein7e-82304
NC_015566:316340:3163403163403176111272Serratia sp. AS12 chromosome, complete genomehypothetical protein7e-82304
NC_016845:4539381:4552667455266745538841218Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-80299
NC_004547:590844:5972375972375984331197Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein4e-79295
NC_010554:2872000:2878804287880428800991296Proteus mirabilis HI4320, complete genomehypothetical protein1e-70267
NC_020181:3328844:3332222333222233333551134Enterobacter aerogenes EA1509E, complete genomeFIG141751: hypothetical protein in PFGI-1-like cluster2e-43177
NC_013716:3512950:3551516355151635527211206Citrobacter rodentium ICC168, complete genomehypothetical protein2e-41170
NC_008463:5246954:5262925526292552642501326Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-37156
NC_009656:4527457:4588475458847545898061332Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein7e-37155
NC_004129:5373886:5388485538848553897651281Pseudomonas fluorescens Pf-5, complete genomehypothetical protein1e-36154
NC_010170:1324758:1355781135578113569711191Bordetella petrii, complete genomehypothetical protein5e-33142
NC_015379:2417312:2460021246002124611661146Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein2e-32140
NC_014532:3555550:3558095355809535594171323Halomonas elongata DSM 2581, complete genomehypothetical protein6e-32139
NC_012660:2143376:2147510214751021487001191Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein1e-31138
NC_007005:1705406:1715223171522317165961374Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein6e-31135
NC_009138:1974935:1987495198749519887451251Herminiimonas arsenicoxydans, complete genomehypothetical protein5e-30132
NC_008782:1510000:1510000151000015112351236Acidovorax sp. JS42, complete genomehypothetical protein5e-30132
NC_016830:3869572:3936500393650039376871188Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein8e-30131
NC_010170:1498253:1498817149881715000611245Bordetella petrii, complete genomehypothetical protein3e-29130
NC_015733:2658337:2659418265941826606111194Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-28126
NC_010688:2781624:2803100280310028043261227Xanthomonas campestris pv. campestris, complete genomehypothetical protein2e-27124
NC_007086:2477040:2481453248145324826791227Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein3e-27123
NC_012731:600518:624522624522625394873Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein4e-27122
NC_009648:5119271:513817451381745139046873Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein4e-27122
NC_008344:49039:1170521170521182271176Nitrosomonas eutropha C91, complete genomehypothetical protein1e-26121
NC_012691:2614603:2626374262637426275791206Tolumonas auensis DSM 9187, complete genomehypothetical protein2e-26120
NC_013421:1780722:1800916180091618021301215Pectobacterium wasabiae WPP163, complete genomehypothetical protein3e-26120
NC_002488:1638946:1698842169884217000981257Xylella fastidiosa 9a5c, complete genomehypothetical protein2e-25117
NC_007484:667879:6684716684716697301260Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein2e-25117
NC_009512:3282500:3305710330571033069271218Pseudomonas putida F1, complete genomehypothetical protein5e-22105
NC_008752:585884:6098056098056110401236Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein7e-22105
NC_010519:1963256:1988533198853319897231191Haemophilus somnus 2336 chromosome, complete genomehypothetical protein8e-21102
NC_002927:960369:9825059825059836891185Bordetella bronchiseptica RB50, complete genomehypothetical protein3e-0860.5