Pre_GI: BLASTP Hits

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Query: NC_003198:2856596:2862665 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 2862665, End: 2862874, Length: 210

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:2842453:284852228485222848731210Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-33139
NC_011147:2814664:282073328207332820942210Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-32137
NC_006511:2819128:282519728251972825406210Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-32137
NC_010102:2967464:297364429736442973853210Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-31132