Pre_GI: BLASTP Hits

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Query: NC_003198:1908238:1921742 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1921742, End: 1922554, Length: 813

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011415:1472500:148594014859401486752813Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-139494
NC_008563:1475500:147759514775951478407813Escherichia coli APEC O1, complete genomeputative transcription regulatory protein2e-138491
NC_002695:1929215:193197819319781932790813Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-135482
NC_002655:2142587:215437521543752155187813Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933R2e-134478
NC_016902:2580774:259449925944992595260762Escherichia coli KO11FL chromosome, complete genomehypothetical protein7e-124443
CP002185:1493280:151059015105901511351762Escherichia coli W, complete genomeputative transcription regulatory protein7e-124443
CP002516:2580774:259449925944992595260762Escherichia coli KO11, complete genomeprotein of unknown function DUF16277e-124443
NC_013364:1596278:160871116087111609247537Escherichia coli O111:H- str. 11128, complete genomehypothetical protein3e-72271
NC_000913:1404000:142077614207761421336561Escherichia coli K12, complete genomeRac prophage; predicted DNA-binding protein9e-69260
NC_010473:1493983:151017215101721510732561Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; predicted DNA-binding protein9e-69260
AC_000091:1407693:142446614244661425026561Escherichia coli W3110 DNA, complete genomepredicted DNA-binding protein9e-69260
NC_014121:1682638:168912816891281689784657Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-1687
NC_009792:1770106:178374517837451784431687Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-0859.7
NC_011601:1269500:127660112766011276801201Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein3e-0859.3