Pre_GI: BLASTP Hits

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Query: NC_002929:3568106:3586988 Bordetella pertussis Tohama I, complete genome

Start: 3586988, End: 3587488, Length: 501

Host Lineage: Bordetella pertussis; Bordetella; Alcaligenaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from a patient with whooping cough and has been studied extensively for over 40 years. Causative agent of whooping cough. This group of organisms is capable of invading the respiratory tract of animals and causing severe diseases. They express a number of virulence factors in order to do this including filamentous hemagglutins for attachment, cytotoxins, and proteins that form a type III secretion system for transport of effector molecules into host cells. This organism, which is unable to persist in the environment, is a strict human pathogen that causes whooping cough. Once a common cause of death in children the development of a vaccine has greatly decreased the number of deaths due to Bordetella pertussis. However, this organism infects and estimated 39 million people and kills hundreds of thousands of people each year.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017223:3608749:362717336271733627673501Bordetella pertussis CS chromosome, complete genomehypothetical protein5e-94342
NC_002927:3716894:373800537380053738505501Bordetella bronchiseptica RB50, complete genomehypothetical protein4e-92336
NC_002927:2338549:236126123612612361761501Bordetella bronchiseptica RB50, complete genomehypothetical protein4e-92336
NC_015563:3074691:308337130833713083862492Delftia sp. Cs1-4 chromosome, complete genomePathogenesis-related transcriptional factor and ERF protein3e-38157
NC_014313:165490:171132171132171617486Hyphomicrobium denitrificans ATCC 51888 chromosome, completePathogenesis-related transcriptional factor and ERF protein6e-30129
NC_012808:4078459:408567340856734086149477Methylobacterium extorquens AM1, complete genomeHNH endonuclease family protein6e-24109
NC_011770:2690501:272554427255442726101558Pseudomonas aeruginosa LESB58, complete genomehypothetical protein2e-21101
NC_011035:541560:542831542831543349519Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative phage associated protein3e-2097.4
NC_013364:2898964:291234129123412912907567Escherichia coli O111:H- str. 11128, complete genomeputative endonuclease6e-2096.7
NC_013364:2645438:264601526460152646581567Escherichia coli O111:H- str. 11128, complete genomehypothetical protein6e-2096.7
NC_013361:3112023:312237631223763122942567Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-2096.7
NC_013008:3525428:354861535486153549181567Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein7e-2096.3
NC_002695:3468873:348963034896303490196567Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein7e-2096.3
NC_002946:1020175:106320710632071063725519Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein, putative phage associated protein2e-1994.7
NC_002655:3538656:355695335569533557558606Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933Y3e-1994
NC_011601:4856717:485836248583624858871510Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeendonuclease, HNH family5e-1993.6
NC_011770:860944:871763871763872272510Pseudomonas aeruginosa LESB58, complete genomeEndY3e-1890.9
NC_007493:1672163:168911316891131689598486Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceputative endonuclease5e-1683.6
NC_010002:3509506:352002335200233520547525Delftia acidovorans SPH-1, complete genomePathogenesis-related transcriptional factor and ERF protein6e-1683.2
NC_011601:717072:735907735907736335429Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeendonuclease6e-1476.6
NC_009255:1369200:137403913740391374575537Burkholderia vietnamiensis G4 chromosome 2, complete sequenceHNH endonuclease2e-1271.6
NC_013282:1200993:121347112134711214031561Cronobacter turicensis, complete genomehypothetical protein2e-1168.6
NC_016048:4047922:407294940729494073512564Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-1065.5
NC_009255:1369200:137188513718851372367483Burkholderia vietnamiensis G4 chromosome 2, complete sequencepathogenesis-related transcriptional factor and ERF protein1e-0962.4
NC_012914:1851102:186774018677401868279540Paenibacillus sp. JDR-2, complete genomePathogenesis-related transcriptional factor and ERF protein3e-0961.2
NC_007964:328825:334182334182334670489Nitrobacter hamburgensis X14, complete genomeHNH endonuclease4e-0960.5
NC_017328:335160:342492342492343031540Shigella flexneri 2002017 chromosome, complete genomeHNH endonuclease7e-0959.7
NC_021182:2536000:254900225490022549733732Clostridium pasteurianum BC1, complete genomeAP2 domain-containing protein7e-0753.5
NC_007493:1672163:169739016973901697896507Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencePossible Endonuclease1e-0652.8
NC_009049:2131017:214179721417972142024228Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence6e-0650.1