Query: NC_016842:1 Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete
Start: 1, End: 32936, Length: 32936
Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria
General Information: This strain was isolated in Western Samoa in 1953. Treponema pallidum subsp. pertenue causes the chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_010741:12542* | 12542 | 32925 | 20384 | Treponema pallidum subsp. pallidum SS14, complete genome | 0 | 39620 | BLASTN svg | BLASTP svg |
| NC_000919:12545* | 12545 | 32928 | 20384 | Treponema pallidum subsp. pallidum str. Nichols, complete genome | 0 | 39610 | BLASTN svg | BLASTP svg |
| NC_015714:1* | 1 | 18364 | 18364 | Treponema paraluiscuniculi Cuniculi A chromosome, complete genome | 0 | 15510 | BLASTN svg | BLASTP svg |
| NC_003869:45560* | 45560 | 67452 | 21893 | Thermoanaerobacter tengcongensis MB4, complete genome | 7e-17 | 97.6 | BLASTN svg | BLASTP svg |
| NC_014538:33718* | 33718 | 55282 | 21565 | Thermoanaerobacter sp. X513 chromosome, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_014209:81643* | 81643 | 120099 | 38457 | Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome, | 1e-12 | 83.8 | BLASTN svg | BLASTP svg |
| NC_013921:36000* | 36000 | 58205 | 22206 | Thermoanaerobacter italicus Ab9 chromosome, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_020134:205000 | 205000 | 224586 | 19587 | Clostridium stercorarium subsp. stercorarium DSM 8532, complete | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_011296:102650* | 102650 | 129142 | 26493 | Thermodesulfovibrio yellowstonii DSM 11347, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_014933:2240000* | 2240000 | 2263868 | 23869 | Bacteroides helcogenes P 36-108 chromosome, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_015555:49842* | 49842 | 90779 | 40938 | Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_019970:35985 | 35985 | 76487 | 40503 | Thermoanaerobacterium thermosaccharolyticum M0795, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_003143:1630000 | 1630000 | 1676099 | 46100 | Yersinia pestis CO92, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_006155:1756000 | 1756000 | 1794676 | 38677 | Yersinia pseudotuberculosis IP 32953, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_008149:2802392 | 2802392 | 2853676 | 51285 | Yersinia pestis Nepal516, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_008150:844727 | 844727 | 890099 | 45373 | Yersinia pestis Antiqua, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_010634:1755548 | 1755548 | 1795424 | 39877 | Yersinia pseudotuberculosis PB1/+, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_019897:3025871* | 3025871 | 3048706 | 22836 | Thermobacillus composti KWC4 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_013730:3208571* | 3208571 | 3245921 | 37351 | Spirosoma linguale DSM 74, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_008536:3988520* | 3988520 | 4010590 | 22071 | Solibacter usitatus Ellin6076, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_004113:1234048* | 1234048 | 1260286 | 26239 | Thermosynechococcus elongatus BP-1, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |